RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SHBQ15464 509 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 ZNF385CQ66K41 422 aaPredicted RBP14.35□□□□□ -0.11
LTBR-201ENST00000228918 UNQ6126/PRO20091Q6UXV3 157 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 OR56B1Q8NGI3 324 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 DCUN1D4Q92564 292 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 ARHGAP5-AS1Q96IT6 56 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 SPSB2Q99619 263 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 OCSTAMPQ9BR26 566 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 PCDHB10Q9UN67 800 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 IGKV1-9A0A0C4DH69 117 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 CRTAPO75718 401 aaPredicted RBP14.35□□□□□ -0.11
LTBR-201ENST00000228918 ZNF43P17038 809 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 KLK2P20151 261 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 SFTPDP35247 375 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 NPY4RP50391 375 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 GFOD2Q3B7J2 385 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 TMPPEQ6ZT21 453 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 CCDC36Q8IYA8 594 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 ZNF283Q8N7M2 679 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 OR1S2Q8NGQ3 325 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 OR14K1Q8NGZ2 314 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 SLC22A8Q8TCC7 542 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 C12orf57Q99622 126 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
LTBR-201ENST00000228918 MED12Q93074 2177 aa14.35□□□□□ -0.11
LTBR-201ENST00000228918 NCOA6Q14686 2063 aaPredicted RBP14.34□□□□□ -0.11
LTBR-201ENST00000228918 AQP7P3A6NL99 342 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 FGF16O43320 207 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 DKK1O94907 266 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 SFT2D2O95562 160 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 GRB2P62993 217 aaKnown RBP14.34□□□□□ -0.11
LTBR-201ENST00000228918 CYCSP99999 105 aaKnown RBP14.34□□□□□ -0.11
LTBR-201ENST00000228918 DEFA5Q01523 94 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 FAM189A2Q15884 450 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 UQCC3Q6UW78 93 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 PEG10Q86TG7 708 aaKnown RBP14.34□□□□□ -0.11
LTBR-201ENST00000228918 ARMC10Q8N2F6 343 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 SLC25A43Q8WUT9 341 aaPredicted RBP14.34□□□□□ -0.11
LTBR-201ENST00000228918 SPACA9Q96E40 222 aaPredicted RBP14.34□□□□□ -0.11
LTBR-201ENST00000228918 GPER1Q99527 375 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 CDC6Q99741 560 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 CRB3Q9BUF7 120 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 RNF126Q9BV68 326 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 E9PLN8 166 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 FPR2P25090 351 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 CLEC18BQ6UXF7 455 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 LHFPL1Q86WI0 220 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 FADS6Q8N9I5 356 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 WDSUB1Q8N9V3 476 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 OR5H2Q8NGV7 314 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 RASL10BQ96S79 203 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 URM1Q9BTM9 101 aaKnown RBP14.34□□□□□ -0.11
LTBR-201ENST00000228918 ASF1BQ9NVP2 202 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 RARRES3Q9UL19 164 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 HDGFL3Q9Y3E1 203 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 FLVCR1Q9Y5Y0 555 aa14.34□□□□□ -0.11
LTBR-201ENST00000228918 A0A0B4J2A0 478 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 RAB19A4D1S5 217 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 ZNF726A6NNF4 738 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 H0YIZ8 118 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.12
LTBR-201ENST00000228918 IGFBP4P22692 258 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 TMEM176BQ3YBM2 270 aaPredicted RBP14.33□□□□□ -0.12
LTBR-201ENST00000228918 CRIP3Q6Q6R5 217 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 ZSCAN4Q8NAM6 433 aaPredicted RBP14.33□□□□□ -0.12
LTBR-201ENST00000228918 RRNAD1Q96FB5 475 aaKnown RBP14.33□□□□□ -0.12
LTBR-201ENST00000228918 NARS2Q96I59 477 aaKnown RBP14.33□□□□□ -0.12
LTBR-201ENST00000228918 NKX6-2Q9C056 277 aaPredicted RBP14.33□□□□□ -0.12
LTBR-201ENST00000228918 RAB18Q9NP72 206 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 SLC39A1Q9NY26 324 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 COA4Q9NYJ1 87 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 NDRG3Q9UGV2 375 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 SHPKQ9UHJ6 478 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 EML6Q6ZMW3 1958 aa14.33□□□□□ -0.12
LTBR-201ENST00000228918 LOC102725191A0A1B0GVB3 256 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 C5orf63A6NC05 138 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 ONECUT2O95948 504 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 IGLV3-1P01715 115 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 PRF1P14222 555 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 RPL35P42766 123 aaKnown RBP14.32□□□□□ -0.12
LTBR-201ENST00000228918 SUPT4H1P63272 117 aaKnown RBP14.32□□□□□ -0.12
LTBR-201ENST00000228918 NAAAQ02083 359 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 SCRN3Q0VDG4 424 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 EIF3IQ13347 325 aaKnown RBP14.32□□□□□ -0.12
LTBR-201ENST00000228918 ARFRP1Q13795 201 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 SLC9A3R2Q15599 337 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 LCN10Q6JVE6 187 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 FAM89BQ8N5H3 189 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 LINC00469Q8N7U9 141 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 BOLLQ8N9W6 283 aaKnown RBP14.32□□□□□ -0.12
LTBR-201ENST00000228918 SLC30A7Q8NEW0 376 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 OR13G1Q8NGZ3 307 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 ROBO4Q8WZ75 1007 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 OR10A2Q9H208 303 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.32□□□□□ -0.12
LTBR-201ENST00000228918 A0A1W2PQM1 296 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 FOXI3A8MTJ6 420 aaPredicted RBP14.32□□□□□ -0.12
LTBR-201ENST00000228918 AMY2BP19961 511 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 ADH6P28332 368 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 SGCAQ16586 387 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms