RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ACKR3P25106 362 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 CDAP32320 146 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 ANKRD55Q3KP44 614 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 EEF1A1P5Q5VTE0 462 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 OPN5Q6U736 354 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
PRDM4-201ENST00000228437 SNX22Q96L94 193 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 LRFN5Q96NI6 719 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 GNG13Q9P2W3 67 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 AK3Q9UIJ7 227 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 R4GMQ9 66 aa12.98□□□□□ -0.33
PRDM4-201ENST00000228437 TRAV36DV7A0A075B6V5 113 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 LINC01553A4QN01 128 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 C9JQL5 133 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 HCRTR1O43613 425 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 EIF4E2O60573 245 aaKnown RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 SLC25A1P53007 311 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 SSBP1Q04837 148 aaKnown RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 GGTLC2Q14390 218 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF813Q6ZN06 617 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 FRZBQ92765 325 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 BARX1Q9HBU1 254 aaPredicted RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 FAM60AQ9NP50 221 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 GPR84Q9NQS5 396 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 DOK5Q9P104 306 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 NLRC5Q86WI3 1866 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 GATCO43716 136 aaKnown RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 ONECUT2O95948 504 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 SCGB1D1O95968 90 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 MMP7P09237 267 aaPredicted RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 CASP6P55212 293 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 ECH1Q13011 328 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 GAMTQ14353 236 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 LCN15Q6UWW0 184 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 NKAIN3Q8N8D7 197 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 MRPL24Q96A35 216 aaKnown RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 SLAMF6Q96DU3 332 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 SAT2Q96F10 170 aaPredicted RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 TEX101Q9BY14 249 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 ESPL1Q14674 2120 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 IGHV3-20A0A0C4DH32 117 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 RAB27BO00194 218 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 BCKDHBP21953 392 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 TAF9Q16594 264 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 LRRC18Q8N456 261 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 PLPP5Q8NEB5 264 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 HOXB13Q92826 284 aaPredicted RBP12.97□□□□□ -0.33
PRDM4-201ENST00000228437 TSLPQ969D9 159 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 LYRM4Q9HD34 91 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 HSF4Q9ULV5 492 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 DOCK9Q9BZ29 2069 aa12.97□□□□□ -0.33
PRDM4-201ENST00000228437 HSPB6O14558 160 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 FBP1P09467 338 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 HLA-DOBP13765 273 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 C1orf140Q5VVS0 124 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 PTCRAQ6ISU1 281 aaPredicted RBP12.96□□□□□ -0.33
PRDM4-201ENST00000228437 RARRES2Q99969 163 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 SLC35B3Q9H1N7 401 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 ICAM5Q9UMF0 924 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 LIPGQ9Y5X9 500 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 RP1L1Q8IWN7 2480 aaPredicted RBP12.96□□□□□ -0.33
PRDM4-201ENST00000228437 MDC1Q14676 2089 aaKnown RBP12.96□□□□□ -0.33
PRDM4-201ENST00000228437 ATXN7O15265 892 aaPredicted RBP12.96□□□□□ -0.33
PRDM4-201ENST00000228437 NSUN5P2Q63ZY6 315 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 ZNF321PQ8N8H1 164 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 RSPRY1Q96DX4 576 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 RNF126Q9BV68 326 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 TINAGQ9UJW2 476 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 ARHGEF17Q96PE2 2063 aaPredicted RBP12.96□□□□□ -0.33
PRDM4-201ENST00000228437 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
PRDM4-201ENST00000228437 HEATR5AQ86XA9 2040 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 GEMIN2O14893 280 aaKnown RBP12.96□□□□□ -0.34
PRDM4-201ENST00000228437 ANGPTL7O43827 346 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 TNFP01375 233 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 PPP1CCP36873 323 aaKnown RBP12.96□□□□□ -0.34
PRDM4-201ENST00000228437 PIGPP57054 158 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 GGNBP1Q5YKI7 109 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 Q6ZSR6 202 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 BIVMQ86UB2 503 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 ADAT3Q96EY9 351 aaPredicted RBP12.96□□□□□ -0.34
PRDM4-201ENST00000228437 BSCL2Q96G97 398 aaPredicted RBP12.96□□□□□ -0.34
PRDM4-201ENST00000228437 HDAC8Q9BY41 377 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 C1orf198Q9H425 327 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 SVILO95425 2214 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 TAAR5O14804 337 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 LYPD3O95274 346 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 TRGC2P03986 189 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 ERGP11308 486 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 FOLR1P15328 257 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 CCNOP22674 350 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 MGAT2Q10469 447 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 TESK1Q15569 626 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF705AQ6ZN79 300 aaPredicted RBP12.96□□□□□ -0.34
PRDM4-201ENST00000228437 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 PADI1Q9ULC6 663 aa12.96□□□□□ -0.34
PRDM4-201ENST00000228437 TDRD6O60522 2096 aaKnown RBP12.95□□□□□ -0.34
PRDM4-201ENST00000228437 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms