RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 UPB1Q9UBR1 384 aa16.74■□□□□ 0.27
YBX3-201ENST00000228251 TMEM82A0PJX8 343 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 SOCS1O15524 211 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 ZNF32P17041 273 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 H2BFSP57053 126 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 SCRN3Q0VDG4 424 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 ZMYND11Q15326 602 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 SLC22A6Q4U2R8 563 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 SFRP5Q5T4F7 317 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 ZNF774Q6NX45 483 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 SLC16A14Q7RTX9 510 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 C1QL2Q7Z5L3 287 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 FGFBP3Q8TAT2 258 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 SNAPC3Q92966 411 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 IP6K3Q96PC2 410 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 FOXB1Q99853 325 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 OR10A2Q9H208 303 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 POFUT1Q9H488 388 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.73■□□□□ 0.27
YBX3-201ENST00000228251 GHRLQ9UBU3 117 aa16.73■□□□□ 0.27
YBX3-201ENST00000228251 PLSCR5A0PG75 271 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 UBE2QL1A1L167 161 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 H3BUI4 141 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 ERVH48-1M5A8F1 160 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 MFNGO00587 321 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 MPIG6BO95866 241 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 B4GALT1P15291 398 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 HIST1H1DP16402 221 aaKnown RBP16.72■□□□□ 0.27
YBX3-201ENST00000228251 PTGFRP43088 359 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 RPS27AP62979 156 aaKnown RBP16.72■□□□□ 0.27
YBX3-201ENST00000228251 MPPED2Q15777 294 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 RSPO4Q2I0M5 234 aaPredicted RBP16.72■□□□□ 0.27
YBX3-201ENST00000228251 CEACAM16Q2WEN9 425 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 ZBTB37Q5TC79 503 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 TMEM59Q9BXS4 323 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 TTTY12Q9BZ98 90 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 WNT5BQ9H1J7 359 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 STMND1H3BQB6 276 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 MMP7P09237 267 aaPredicted RBP16.72■□□□□ 0.27
YBX3-201ENST00000228251 ZNF708P17019 499 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 TBPP20226 339 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 ACKR3P25106 362 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 PSG4Q00888 419 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 NRN1LQ496H8 165 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 PDSS1Q5T2R2 415 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 PIP4P1Q86T03 277 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 SUMF1Q8NBK3 374 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 UXS1Q8NBZ7 420 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 MDS2Q8NDY4 140 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 HAS2Q92819 552 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 CYYR1Q96J86 154 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 LINC00470Q9BZP3 86 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 CHIAQ9BZP6 476 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 OR2H1Q9GZK4 316 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 BANF2Q9H503 90 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 ABI3Q9P2A4 366 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 OPN4Q9UHM6 478 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 PIGLQ9Y2B2 252 aa16.72■□□□□ 0.27
YBX3-201ENST00000228251 MTRF1O75570 445 aaKnown RBP16.71■□□□□ 0.27
YBX3-201ENST00000228251 OR4E1P0C645 316 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 ITGA3P26006 1051 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 RFC3P40938 356 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 FAM189A2Q15884 450 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 PNLIPRP3Q17RR3 467 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 RNASE10Q5GAN6 216 aaKnown RBP16.71■□□□□ 0.27
YBX3-201ENST00000228251 OR52W1Q6IF63 320 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 GLRX5Q86SX6 157 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 CCDC107Q8WV48 283 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 RAB3CQ96E17 227 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 PRRT1Q99946 306 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 PLA2G3Q9NZ20 509 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 B4GALT7Q9UBV7 327 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 VSIG4Q9Y279 399 aa16.71■□□□□ 0.27
YBX3-201ENST00000228251 FREM1Q5H8C1 2179 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 DISC1C4P0D8 188 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 RAD51DO75771 328 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 HTR2BP41595 481 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 STK11Q15831 433 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 DMRTC1Q5HYR2 192 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 TEX261Q6UWH6 196 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 CHMP1BQ7LBR1 199 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 SKA3Q8IX90 412 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 TMEM251Q8N6I4 163 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 OR56B1Q8NGI3 324 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 TM2D1Q9BX74 207 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 TIMM10BQ9Y5J6 103 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 U3KQ87 197 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
YBX3-201ENST00000228251 CDK2AP1O14519 115 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
YBX3-201ENST00000228251 TOXO94900 526 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 MPC2O95563 127 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 PATE4P0C8F1 98 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 MAGEA5P43359 124 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 UBE2MP61081 183 aaKnown RBP16.69■□□□□ 0.26
YBX3-201ENST00000228251 TSPO2Q5TGU0 170 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 TMEM42Q69YG0 159 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 FTMTQ8N4E7 242 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 AKR7LQ8NHP1 331 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 GPER1Q99527 375 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms