RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 AGAP14A8MT82 685 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 DVL1O14640 695 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 SSSCA1O60232 199 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 MPZL1O95297 269 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 DVL1P1P54792 670 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-201ENST00000223398 OR10R2Q8NGX6 335 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 RFESDQ8TAC1 157 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 HMGCLL1Q8TB92 370 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 SLC7A6Q92536 515 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 SIAEQ9HAT2 523 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 MTCH1Q9NZJ7 389 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 TRPM6Q9BX84 2022 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 ST8SIA3O43173 380 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF85Q03923 595 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 DCAF10Q5QP82 559 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 MRGPREQ86SM8 312 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 MSRB3Q8IXL7 192 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 M6PRP20645 277 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 THBS4P35443 961 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 GNG3P63215 75 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 MOGAT1Q96PD6 335 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF251Q9BRH9 671 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 PLAC1Q9HBJ0 212 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 RGPD4Q7Z3J3 1758 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 HPNP05981 417 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 CD3EP07766 207 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 TBPP20226 339 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 TMPRSS11FQ6ZWK6 438 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 CMBLQ96DG6 245 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 SPAG17Q6Q759 2223 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 SULT1C2O00338 296 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 CD3DP04234 171 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 COX7A1P24310 79 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 RFX2P48378 723 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 KLF3P57682 345 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-201ENST00000223398 CD226Q15762 336 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 UBE2IP63279 158 aaKnown RBP16.49■□□□□ 0.23
CLIP2-201ENST00000223398 SLC25A35Q3KQZ1 300 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 HIST2H3PS2Q5TEC6 136 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 SLC7A5P1Q8MH63 180 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 TM4SF19Q96DZ7 209 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 CHST6Q9GZX3 395 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 DLL4Q9NR61 685 aa16.49■□□□□ 0.23
CLIP2-201ENST00000223398 OR6C68A6NDL8 312 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 F6UZH7 168 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 GABRA1P14867 456 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 OR13G1Q8NGZ3 307 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 NUBPLQ8TB37 319 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 EXTL1Q92935 676 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 SIRT5Q9NXA8 310 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 MRPS18BQ9Y676 258 aaKnown RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 HSPB2A8KAH6 182 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 SSX4O60224 188 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 GFRA3O60609 400 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 HSPB2Q16082 182 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 MARCH1Q8TCQ1 289 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 MYOZ1Q9NP98 299 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 LIN7CQ9NUP9 197 aaKnown RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 TBX19O60806 448 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 ERHP84090 104 aaKnown RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 C1QL3Q5VWW1 255 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 STUMQ69YW2 141 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 BHLHA15Q7RTS1 189 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 NMES1Q9C002 83 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 KCNIP2Q9NS61 270 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 ATXN7O15265 892 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 PPP1CBP62140 327 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 GLCCI1Q86VQ1 547 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 LYSMD2Q8IV50 215 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 C17orf78Q8N4C9 275 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 OR2G3Q8NGZ4 309 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 SLC35B4Q969S0 331 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 DOK1Q99704 481 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 MAGT1Q9H0U3 335 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 CDX4O14627 284 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 HBE1P02100 147 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 PCBP3P57721 371 aaKnown RBP16.48■□□□□ 0.23
CLIP2-201ENST00000223398 GAB4Q2WGN9 574 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 DRAM2Q6UX65 266 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 NAA40Q86UY6 237 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 ZFP82Q8N141 532 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 LRRC29Q8WV35 223 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 SAMD10Q9BYL1 202 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 AUNIPQ9H7T9 357 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 BIN3Q9NQY0 253 aa16.48■□□□□ 0.23
CLIP2-201ENST00000223398 A0A1B0GTH9 108 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 HSBP1L1C9JCN9 74 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 PLPP3O14495 311 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 KCNIP4Q6PIL6 250 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 SFT2D1Q8WV19 159 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 IL20Q9NYY1 176 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 TRIOBPQ9H2D6 2365 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 K7EQM0 130 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 EPPINO95925 133 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 IGHV3-13P01766 116 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 IGHV3-7P01780 117 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 FUT7Q11130 342 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 FAM109AQ8N4B1 249 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 TMEM230Q96A57 120 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms