RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ZNF813Q6ZN06 617 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 OR6S1Q8NH40 331 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 GALMQ96C23 342 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 MRPL38Q96DV4 380 aaKnown RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 ALX4Q9H161 411 aaPredicted RBP3.99□□□□□ -1.77
CHD9-201ENST00000219084 ADGRL4Q9HBW9 690 aa3.99□□□□□ -1.77
CHD9-201ENST00000219084 ZNF891A8MT65 544 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 CTAG2O75638 210 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 NKX2-2O95096 273 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 SLC25A4P12235 298 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 SQSTM1Q13501 440 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 TRA2AQ13595 282 aaKnown RBP eCLIP3.98□□□□□ -1.77
CHD9-201ENST00000219084 IRF3Q14653 427 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 PRTGQ2VWP7 1150 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 AUNIPQ9H7T9 357 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 GPR84Q9NQS5 396 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ANAPC1Q9H1A4 1944 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 FAM74A7A6NL05 159 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 MMP9P14780 707 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CD1CP29017 333 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 HLXQ14774 488 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 TRMT12Q53H54 448 aaKnown RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 NHLRC1Q6VVB1 395 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 TMEM182Q6ZP80 229 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 MEX3DQ86XN8 651 aaKnown RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 ZBTB44Q8NCP5 570 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 HLA-CQ95604 372 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ASB16Q96NS5 453 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CITED2Q99967 270 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 NXF5Q9H1B4 397 aaKnown RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 SLCO1B1Q9Y6L6 691 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ESPL1Q14674 2120 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 A6NIN4 97 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 STMND1H3BQB6 276 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CD3DP04234 171 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CD80P33681 288 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 P2RY1P47900 373 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 OR2B8PP59922 312 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 FOXO1Q12778 655 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 GGTLC2Q14390 218 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 PHLDA2Q53GA4 152 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 PRSS54Q6PEW0 395 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 TMEM65Q6PI78 240 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 DGAT2L6Q6ZPD8 337 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 TMEM217Q8N7C4 229 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ZNF511Q8NB15 262 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CCDC74AQ96AQ1 378 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CCDC74BQ96LY2 380 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 OR6C1Q96RD1 312 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 VAMP8Q9BV40 100 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 IKZF5Q9H5V7 419 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 GPR173Q9NS66 373 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 FBXO34Q9NWN3 711 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 B9D1Q9UPM9 204 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 KLF13Q9Y2Y9 288 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 ALPK3Q96L96 1907 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 A0A1W2PQD3 144 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 SEC14L6B5MCN3 397 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CHEK1O14757 476 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 TRAF3IP2O43734 574 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 LRP3O75074 770 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 PEX11BO96011 259 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 MLF2Q15773 248 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 NKAIN1Q4KMZ8 207 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 SIRT6Q8N6T7 355 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 LSMEM1Q8N8F7 131 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 C17orf47Q8NEP4 570 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ANGPTL4Q9BY76 406 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 WDR61Q9GZS3 305 aaKnown RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 TWSG1Q9GZX9 223 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CA14Q9ULX7 337 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 KIF26AQ9ULI4 1882 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 DOCK8Q8NF50 2099 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 HSD17B6O14756 317 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 PDE6DO43924 150 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 DEDDO75618 318 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CBR3O75828 277 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 STAG3L2P0CL84 134 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 FUT3P21217 361 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ZNF90Q03938 601 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 DHRS2Q13268 280 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 DEFB133Q30KQ1 61 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 OVCH2Q7RTZ1 564 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CPEB2Q7Z5Q1 589 aaKnown RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 MARCH3Q86UD3 253 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ZNF439Q8NDP4 499 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 C11orf40Q8WZ69 217 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 GPR137Q96N19 417 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 TXNDC17Q9BRA2 123 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CTSFQ9UBX1 484 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 GDF2Q9UK05 429 aaPredicted RBP3.98□□□□□ -1.77
CHD9-201ENST00000219084 PLXNA2O75051 1894 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 CXorf65A6NEN9 183 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 NME2P1O60361 137 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 ORM1P02763 201 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 FGF2P09038 288 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 OR5H8P0DN80 308 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 LIPCP11150 499 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 GABRA2P47869 451 aa3.98□□□□□ -1.77
CHD9-201ENST00000219084 RAE1P78406 368 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms