RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 F12P00748 615 aaPredicted RBP19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 PI3P19957 117 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 ZNF121P58317 390 aaPredicted RBP19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 EIF5AP63241 154 aaKnown RBP19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 RAB32Q13637 225 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 SLC25A53Q5H9E4 307 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 ADPRHL1Q8NDY3 354 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 SEMA5BQ9P283 1151 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 TAAR5O14804 337 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 AMY2BP19961 511 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 CLRN1P58418 232 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 GFOD2Q3B7J2 385 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 DMBX1Q8NFW5 382 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 CYYR1Q96J86 154 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 METTL8Q9H825 291 aaKnown RBP19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 SEC61A2Q9H9S3 476 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 BIN3Q9NQY0 253 aa19.54■□□□□ 0.72
HTATSF1-201ENST00000218364 FIGNL2A6NMB9 653 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 FOXI3A8MTJ6 420 aaPredicted RBP19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 CRTAPO75718 401 aaPredicted RBP19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 HCKP08631 526 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 IGFBP4P22692 258 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 GABREP78334 506 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 SLC25A47Q6Q0C1 308 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 COMMD2Q86X83 199 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 UEVLDQ8IX04 471 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 OR51F2Q8NH61 342 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 PNRC2Q9NPJ4 139 aaKnown RBP19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 POLR1DQ9Y2S0 133 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 MTCH2Q9Y6C9 303 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 TRIOBPQ9H2D6 2365 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 PQLC2LA1A4F0 135 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 SHISA8B8ZZ34 492 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 IGHG1P01857 330 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 MUC1P15941 1255 aaPredicted RBP19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 MYBPHQ13203 477 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 ARFRP1Q13795 201 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 DOK3Q7L591 496 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 DEFB119Q8N690 84 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 NFAM1Q8NET5 270 aaPredicted RBP19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 MRGPRX4Q96LA9 322 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 OR10A2Q9H208 303 aa19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 ESRP2Q9H6T0 727 aaKnown RBP19.53■□□□□ 0.72
HTATSF1-201ENST00000218364 KNL1Q8NG31 2342 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 SLC2A1P11166 492 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 ANOS1P23352 680 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 P2RY4P51582 365 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 TAS2R46P59540 309 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 EIF3IQ13347 325 aaKnown RBP19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 MFAP5Q13361 173 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 KCNMB1Q16558 191 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 EIF5AL1Q6IS14 154 aaKnown RBP19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 PLXDC1Q8IUK5 500 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 MICU1Q9BPX6 476 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 HRH4Q9H3N8 390 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 ZNF768Q9H5H4 540 aaKnown RBP19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 TMEM265A0A087WTH1 108 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 IGKV1-9A0A0C4DH69 117 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 RPL35P42766 123 aaKnown RBP19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 OR3A2P47893 321 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 SURF2Q15527 256 aaPredicted RBP19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 SHISA6Q6ZSJ9 500 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 GLYATL2Q8WU03 294 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 FAM71F1Q96KD3 344 aaPredicted RBP19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 TGIF2Q9GZN2 237 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 OR2S2Q9NQN1 319 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 COA4Q9NYJ1 87 aa19.52■□□□□ 0.72
HTATSF1-201ENST00000218364 GLRA1P23415 457 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 SYT13Q7L8C5 426 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 TMEM200AQ86VY9 491 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 EMG1Q92979 244 aaKnown RBP19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 CHRDQ9H2X0 955 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 SLC22A11Q9NSA0 550 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 GHRLQ9UBU3 117 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 FAM96BQ9Y3D0 163 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 CDAP32320 146 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 ALDH3B1P43353 468 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 HNRNPKP61978 463 aaKnown RBP eCLIP19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 POC1BQ8TC44 478 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 ZNF501Q96CX3 271 aaPredicted RBP19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 GPER1Q99527 375 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 TPSD1Q9BZJ3 242 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 ASH2LQ9UBL3 628 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 RP1P56715 2156 aa19.51■□□□□ 0.71
HTATSF1-201ENST00000218364 PMS2P1A4D2B8 440 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 METTL12A8MUP2 240 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 TRAF3IP2O43734 574 aaPredicted RBP19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 PRF1P14222 555 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 MSX1P28360 303 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 DHPSP49366 369 aaPredicted RBP19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 AKR1D1P51857 326 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 SNU13P55769 128 aaKnown RBP19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 FOXL2P58012 376 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 SKA3Q8IX90 412 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 OR14K1Q8NGZ2 314 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 NECAB3Q96P71 396 aaPredicted RBP19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 ST6GALNAC5Q9BVH7 336 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 PHF3Q92576 2039 aaKnown RBP19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 PLPPR5Q32ZL2 321 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 TAF9BQ9HBM6 251 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms