RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SOX7Q9BT81 388 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 METTL7AQ9H8H3 244 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 CTSSP25774 331 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 ECH1Q13011 328 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 ARFRP1Q13795 201 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 PLEKHN1Q494U1 663 aaPredicted RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 IL34Q6ZMJ4 242 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 OR5B2Q96R09 309 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 MMP26Q9NRE1 261 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 MYOTQ9UBF9 498 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 DNAJB11Q9UBS4 358 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 ZNF629Q9UEG4 869 aaPredicted RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 NDRG3Q9UGV2 375 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 OSGIN2Q9Y236 505 aa11.74□□□□□ -0.53
SRP54-201ENST00000216774 CARHSP1Q9Y2V2 147 aaKnown RBP11.74□□□□□ -0.53
SRP54-201ENST00000216774 ZFAND5O76080 213 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 QDPRP09417 244 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 PRF1P14222 555 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 ZNF43P17038 809 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 OR3A2P47893 321 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 SCRN3Q0VDG4 424 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 SURF2Q15527 256 aaPredicted RBP11.73□□□□□ -0.53
SRP54-201ENST00000216774 SLC9A3R2Q15599 337 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 AADACL3Q5VUY0 350 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 CARD17Q5XLA6 110 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 TMPPEQ6ZT21 453 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 FAM57BQ71RH2 274 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 ZNF283Q8N7M2 679 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 SLC38A9Q8NBW4 561 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 OR10G3Q8NGC4 313 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 OR14K1Q8NGZ2 314 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 TMED6Q8WW62 240 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 PRELID3BQ9Y3B1 194 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 PHF3Q92576 2039 aaKnown RBP11.73□□□□□ -0.53
SRP54-201ENST00000216774 ARID1BQ8NFD5 2236 aaPredicted RBP11.73□□□□□ -0.53
SRP54-201ENST00000216774 BRWD1Q9NSI6 2320 aa11.73□□□□□ -0.53
SRP54-201ENST00000216774 IGKV1-9A0A0C4DH69 117 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 FIGNL2A6NMB9 653 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ZNF726A6NNF4 738 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 FOXI3A8MTJ6 420 aaPredicted RBP11.72□□□□□ -0.53
SRP54-201ENST00000216774 GPR31O00270 319 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ADAP1O75689 374 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ACTL6AO96019 429 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 FAM157CP0CG43 387 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 NR2C1P13056 603 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ADCYAP1P18509 176 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ACY1Q03154 408 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ARL6IP1Q15041 203 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 OR2M3Q8NG83 312 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 C2orf50Q96LR7 162 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 HPF1Q9NWY4 346 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 HDGFL3Q9Y3E1 203 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 A0A1W2PNR3 127 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 A0A1W2PP11 408 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 AQP7P3A6NL99 342 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 SERPINE3A8MV23 424 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ZNF814B7Z6K7 855 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 TLX3O43711 291 aaPredicted RBP11.72□□□□□ -0.53
SRP54-201ENST00000216774 IGLV3-1P01715 115 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 MYF5P13349 255 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ADH6P28332 368 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 EIF1P41567 113 aaKnown RBP11.72□□□□□ -0.53
SRP54-201ENST00000216774 PTGFRP43088 359 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
SRP54-201ENST00000216774 LSM6P62312 80 aaKnown RBP11.72□□□□□ -0.53
SRP54-201ENST00000216774 KISS1Q15726 138 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 FAM69BQ5VUD6 431 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ZNF585AQ6P3V2 769 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 TMEM71Q6P5X7 295 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 CPEB2Q7Z5Q1 589 aaKnown RBP11.72□□□□□ -0.53
SRP54-201ENST00000216774 POC1AQ8NBT0 407 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 OR51T1Q8NGJ9 327 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 SLC22A8Q8TCC7 542 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 ROBO4Q8WZ75 1007 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 SAT2Q96F10 170 aaPredicted RBP11.72□□□□□ -0.53
SRP54-201ENST00000216774 CNTNAP3BQ96NU0 1288 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 SLC26A1Q9H2B4 701 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 TRIOO75962 3097 aa11.72□□□□□ -0.53
SRP54-201ENST00000216774 EYSQ5T1H1 3165 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 H7C2Y5 167 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 CA11O75493 328 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 OR2J2O76002 312 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 CSTBP04080 98 aaKnown RBP11.71□□□□□ -0.53
SRP54-201ENST00000216774 NAT2P11245 290 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 RPS2P15880 293 aaKnown RBP11.71□□□□□ -0.53
SRP54-201ENST00000216774 THBS4P35443 961 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 AFF3P51826 1226 aaKnown RBP11.71□□□□□ -0.53
SRP54-201ENST00000216774 EIF5AP63241 154 aaKnown RBP11.71□□□□□ -0.53
SRP54-201ENST00000216774 DCDP81605 110 aaKnown RBP11.71□□□□□ -0.53
SRP54-201ENST00000216774 IL15RAQ13261 267 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 PPA1Q15181 289 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
SRP54-201ENST00000216774 RTL6Q6ICC9 239 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms