RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 DUX4L4P0CJ87 422 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 DUX4L5P0CJ88 424 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 DUX4L6P0CJ89 424 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 DUX4L7P0CJ90 424 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 FCGR2AP12318 317 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 RAB6AP20340 208 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 CFPP27918 469 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 AIMP2Q13155 320 aaKnown RBP7.31□□□□□ -1.24
CDC27-201ENST00000066544 PDCD1Q15116 288 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 PAN3Q58A45 887 aaKnown RBP7.31□□□□□ -1.24
CDC27-201ENST00000066544 OR52H1Q8NGJ2 320 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 KCNG3Q8TAE7 436 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 SPSB2Q99619 263 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 SLC25A32Q9H2D1 315 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 ZNF768Q9H5H4 540 aaKnown RBP7.31□□□□□ -1.24
CDC27-201ENST00000066544 C5orf66Q9H5L9 145 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 DUX4Q9UBX2 424 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 LHX6Q9UPM6 363 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 TOR1AO14656 332 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 ZNF17P17021 662 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 ACY1Q03154 408 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 TMEM71Q6P5X7 295 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 CLEC18BQ6UXF7 455 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 ZNF837Q96EG3 531 aaPredicted RBP7.31□□□□□ -1.24
CDC27-201ENST00000066544 MRGPRX4Q96LA9 322 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 SMIM3Q9BZL3 60 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 SLC6A15Q9H2J7 730 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 OR5AC2Q9NZP5 309 aa7.31□□□□□ -1.24
CDC27-201ENST00000066544 MELTFP08582 738 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 CALCRP30988 508 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 TREM1Q9NP99 234 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 PLEK2Q9NYT0 353 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 MRPS17Q9Y2R5 130 aaKnown RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 GP1BAP07359 652 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 OPRM1P35372 400 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 KISS1Q15726 138 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 CLEC9AQ6UXN8 241 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 C6orf201Q7Z4U5 140 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 WDSUB1Q8N9V3 476 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 ZSCAN4Q8NAM6 433 aaPredicted RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 OR2M3Q8NG83 312 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 NUBPLQ8TB37 319 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 SPACA9Q96E40 222 aaPredicted RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 HRH4Q9H3N8 390 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 LDAHQ9H6V9 325 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 FAM96BQ9Y3D0 163 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 SIGLEC6O43699 453 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 DUS4LO95620 317 aaKnown RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 PTGDSP41222 190 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 CSNK1A1P48729 337 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 SRSF3P84103 164 aaKnown RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 GUCA2BQ16661 112 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 PLEKHN1Q494U1 663 aaPredicted RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 PHYHD1Q5SRE7 291 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 PPP1R3BQ86XI6 285 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 ZDHHC22Q8N966 263 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 CCDC74BQ96LY2 380 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 ARPC5LQ9BPX5 153 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 UQCC2Q9BRT2 126 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 UBE2ZQ9H832 354 aaPredicted RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 ZNF581Q9P0T4 197 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 DMDP11532 3685 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 MUC3AQ02505 3323 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 FRYQ5TBA9 3013 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 CPAMD8Q8IZJ3 1885 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 FBXO24O75426 580 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 CFIP05156 583 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 TMEM225BP0DP42 221 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 ICAM2P13598 275 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 ANKRD55Q3KP44 614 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 LPCAT3Q6P1A2 487 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 OR5AP2Q8NGF4 316 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 TOMM40LQ969M1 308 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 TMEM230Q96A57 120 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 OR10C1Q96KK4 312 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 C1orf147Q96MC9 270 aaPredicted RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 URM1Q9BTM9 101 aaKnown RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 OR10A2Q9H208 303 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 GPR173Q9NS66 373 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 FREM1Q5H8C1 2179 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 IGKV1D-8A0A087WSZ0 117 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 GPR85P60893 370 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 RAB32Q13637 225 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 TFAP2EQ6VUC0 442 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 MOB3CQ70IA8 216 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 TMEM17Q86X19 198 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 PNLDC1Q8NA58 520 aaKnown RBP7.3□□□□□ -1.24
CDC27-201ENST00000066544 SLC22A8Q8TCC7 542 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 EDAQ92838 391 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 MR1Q95460 341 aa7.3□□□□□ -1.24
CDC27-201ENST00000066544 FAM230AA0A1W2PPH8 454 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 CCDC85CA6NKD9 419 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 CHRM2P08172 466 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 AKR1D1P51857 326 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SHBQ15464 509 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 DRAM2Q6UX65 266 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 OR13G1Q8NGZ3 307 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 DYRK2Q92630 601 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 PTX4Q96A99 478 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms