RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 BMP5P22003 454 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 JAG1P78504 1218 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 FAM3CQ92520 227 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SCAMP4Q969E2 229 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 DNAJA3Q96EY1 480 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SGIP1Q9BQI5 828 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 C19orf24Q9BVV8 132 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 KLF16Q9BXK1 252 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CGGBP1Q9UFW8 167 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 NUMBLQ9Y6R0 609 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CLEC18AA5D8T8 446 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ZAR1LA6NP61 321 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 GEMIN2O14893 280 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CTDSPLO15194 276 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 KRASP01116 189 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 S100A4P26447 101 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PTGFRP43088 359 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 EMP3P54852 163 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PPP1R8Q12972 351 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 Q1RN00 199 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CYB561A3Q8NBI2 242 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CLEC18CQ8NCF0 446 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 BANF2Q9H503 90 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PTBP3O95758 552 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 MMP9P14780 707 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 GABRB1P18505 474 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 THBS4P35443 961 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 MPV17LQ2QL34 196 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 KHDC3LQ587J8 217 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 VRK2Q86Y07 508 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 LSMEM1Q8N8F7 131 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 KLK6Q92876 244 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 RASD2Q96D21 266 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 MENTQ9BUN1 341 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 LSM2Q9Y333 95 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SLCO1B1Q9Y6L6 691 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TRAV27A0A087WT01 109 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 P2RY2P41231 377 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PIGPP57054 158 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 RPL11P62913 178 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ID2Q02363 134 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TXNRD3NBQ6F5E7 133 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SLCO4C1Q6ZQN7 724 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 DCXRQ7Z4W1 244 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 MRGPRX3Q96LB0 322 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF230Q9UIE0 474 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 M0R296 226 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ST6GAL1P15907 406 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PPICP45877 212 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 GLIPR1L1Q6UWM5 242 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SLC25A42Q86VD7 318 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM147Q9BVK8 224 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SLAMF8Q9P0V8 285 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 H0YGG7 62 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CBR3O75828 277 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 UBE2IP63279 158 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 LINC01559Q495D7 138 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR5AS1Q8N127 324 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF355PQ9NSJ1 428 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 LINC01549A6NIU2 74 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 RIGQ13278 110 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 MADCAM1Q13477 382 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 GAB1Q13480 694 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CIRBPQ14011 172 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM217Q8N7C4 229 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR5AR1Q8NGP9 310 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CRYGNQ8WXF5 182 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PRSS37A4D1T9 235 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 IL2RAP01589 272 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TNFSF10P50591 281 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SKP2Q13309 424 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CEBPEQ15744 281 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CORO6Q6QEF8 472 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMPRSS9Q7Z410 1059 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 GDF7Q7Z4P5 450 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 LRP11Q86VZ4 500 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OR5R1Q8NH85 324 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 IGSF8Q969P0 613 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TAAR9Q96RI9 348 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SPANXCQ9NY87 97 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SLCO1C1Q9NYB5 712 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 NAT8Q9UHE5 227 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 PITPNC1Q9UKF7 332 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 FRG2CA6NGY1 282 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SLC17A2O00624 439 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CD82P27701 267 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 SNU13P55769 128 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM267Q0VDI3 215 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 LAIR1Q6GTX8 287 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 C11orf87Q6NUJ2 197 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 RSPO2Q6UXX9 243 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 NXF5Q9H1B4 397 aaKnown RBP5.51□□□□□ -1.53
VPS13D-201ENST00000011700 CA14Q9ULX7 337 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 LRP5O75197 1615 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 MYADML2A6NDP7 307 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 H7C1C5 153 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 OBSL1O75147 1896 aa5.51□□□□□ -1.53
VPS13D-201ENST00000011700 F7P08709 466 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms