RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Gm9817Q9D2M0 144 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 SrrQ9QZX7 339 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Gk2Q9WU65 554 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Rhox3gB9EJQ9 160 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Nkx6-2D3Z4R4 277 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Socs1O35716 212 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 P01673 111 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 P2rx1P51576 399 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Cdk5r1P61809 307 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Htr2bQ02152 479 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Q5SPV6 233 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Hs3st3a1Q8BKN6 393 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 BphlQ8R164 291 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Mmd2Q8R189 247 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Vmn1r17Q8R2D8 303 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 GcaQ8VC88 220 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Prr22F6TNE3 422 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Plscr5J3QM92 274 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 P01644 108 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 P01645 108 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 P01646 108 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 P01647 108 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Lrtm2Q8BGX3 370 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Tmem41bQ8K1A5 291 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Sntb1Q99L88 537 aaKnown RBP13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Sun5Q9DA32 373 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Trav1A0A075B5Z4 110 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Slc38a6G3UVW3 457 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Cd79aP11911 220 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Fpr1P33766 364 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Bmp8aP34821 399 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Bmp8bP55105 399 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Lin28aQ8K3Y3 209 aaKnown RBP13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Vmn1r37Q8R2E4 302 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr669Q8VGU9 317 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 FrkQ922K9 512 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Ear6Q923L7 155 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Rpl7l1Q9D8M4 246 aaKnown RBP13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Arl3Q9WUL7 182 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Gm11214V9GX06 183 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Gm42420A0A0J9YUQ2 99 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Gm8882E9Q7E4 283 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Vmn1r80L7N1Z3 308 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Zfp13P10754 512 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Klkb1P26262 638 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr1500Q7TQQ3 311 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr58Q7TRF6 309 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Ankrd46Q8BTZ5 228 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Tmem56Q8CGF5 276 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Ropn1lQ9EQ00 218 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Trex2Q9R1A9 236 aa13.47□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Ice1E9Q286 2241 aaKnown RBP13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Fcrl6A1YIY0 268 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr250E9PV37 331 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr248E9Q1L6 309 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Cyp2d37-psF6YKB5 150 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr199F6ZUS0 308 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Nkx2-6P43688 289 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Uck1P52623 277 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Stard6P59096 233 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 MybphP70402 483 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 PkibQ04758 92 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Slc22a14Q497L9 629 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Fzd6Q61089 709 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olig3Q6PFG8 273 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr1459Q8VFV9 307 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Gabrg1Q9R0Y8 465 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Zfp964B2RR88 472 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 SrmQ64674 302 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Galnt2Q6PB93 570 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Mrps10Q80ZK0 160 aaKnown RBP13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Fam124bQ8BLQ0 456 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Hif1anQ8BLR9 349 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 PigtQ8BXQ2 582 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Olfr1412Q8VET3 321 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Mrpl3Q99N95 348 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Magt1Q9CQY5 335 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Tgm1Q9JLF6 815 aa13.46□□□□□ -0.25
Pcdh20-201ENSMUST00000061628 Dcst2A0A140LIJ0 701 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Rpl7a-ps5A0A140T8L3 268 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr39E9PVX1 319 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr376E9Q4M1 320 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Rnf165E9QAU8 347 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr64F8VPZ8 307 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 TectbO08524 329 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Prdx6O08709 224 aaKnown RBP13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Cd40P27512 289 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Slc6a9P28571 692 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Hsd17b8P50171 259 aaKnown RBP13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Slc16a11Q5NC32 447 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gnb3Q61011 340 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Rph3alQ768S4 302 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Pcyt1bQ811Q9 369 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 FevQ8QZW2 237 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Seh1lQ8R2U0 360 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ifi27l2bQ8VC49 283 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Lypd6bQ9D7F2 191 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Igkv12-98A0A0G2JGF9 115 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gm14403A2BFU4 402 aa13.46□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 P01804 111 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms