RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr1140Q7TR39 311 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1457Q8VFK3 317 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ythdf2Q91YT7 579 aaKnown RBP10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nsa2Q9CR47 260 aaKnown RBP10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tnfrsf22Q9ER62 198 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 TollipQ9QZ06 274 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm10036E9PYL9 178 aaKnown RBP10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Zfp493E9Q1L8 384 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pcgf2P23798 342 aaKnown RBP10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slc11a1P41251 548 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1110Q8VG38 312 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cts7Q91ZF2 331 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mrpl54Q9CPW3 135 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Med30Q9CQI9 178 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Nup214Q80U93 2085 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Btbd35f21A0A140T8Q5 498 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Prr23a1G3UW32 258 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hoxa1P09022 331 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gja4P28235 333 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cdk5P49615 292 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1465Q7TQR2 307 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Vmn1r19Q8R2C7 308 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dus3lQ91XI1 637 aaKnown RBP10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Psat1Q99K85 370 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mid1ip1Q9CQ20 182 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1097A2AVA9 315 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr62L7MU75 315 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dnmt3bO88509 859 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tmem38aQ3TMP8 298 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr804Q7TRH7 314 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Eddm3bQ8K0E4 149 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pex13Q9D0K1 405 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mmp1bQ9EPL6 463 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rtp4Q9ER80 249 aaKnown RBP10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gabrg1Q9R0Y8 465 aa10.96□□□□□ -0.66
Trim56-201ENSMUST00000054384 Plscr5J3QM92 274 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Wsb2O54929 404 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cbr2P08074 244 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 GypaP14220 168 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dgcr2P98154 548 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 CpeQ00493 476 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fbll1Q80WS3 314 aaKnown RBP10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Krtcap3Q8K177 240 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Alkbh3Q8K1E6 286 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Lgi3Q8K406 548 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Foxe1Q8R2I0 371 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fam103a1Q9CQY2 119 aaKnown RBP10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gins1Q9CZ15 196 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Trappc4Q9ES56 219 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ube2j1Q9JJZ4 318 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tgm1Q9JLF6 815 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ubl3Q9Z2M6 117 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ypel5P62700 121 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tex52Q3TTI8 308 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cdkn2dQ60773 166 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 St8sia3Q64689 380 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tacstd2Q8BGV3 317 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 PisdQ8BSF4 406 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ebf4Q8K4J2 599 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dbil5O09035 87 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Acp5Q05117 327 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Zfp948Q6DFU8 667 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gpr157Q8C206 330 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 2010315B03RikJ3QK55 433 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1015Q7TR94 312 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tox4Q8BU11 619 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slco1b2Q9JJL3 689 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm11009F7CWA7 138 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dscr3O35075 297 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rhox4dQ2MDG0 205 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rhox4eQ504P9 205 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 MyorgQ69ZQ1 716 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ptbp3Q8BHD7 523 aaKnown RBP10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Q9D7E4 109 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rhox4bQ9JI43 205 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pus1Q9WU56 423 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fut1O09160 376 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gpr27O54897 379 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 SryQ05738 395 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 TfptQ3U1J1 259 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 SspnQ62147 216 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr479Q7TRV1 327 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cdc42ep2Q8JZX9 214 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 RfesdQ8K2P6 157 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tex33Q9D9J2 266 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Lgi1Q9JIA1 557 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm45808A0A1B0GSH8 263 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 DdostO54734 441 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fgf13P70377 245 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cyp1b1Q64429 543 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm5771Q792Y9 245 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 F830045P16RikQ8BJ95 487 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 V1ra11Q8R2E6 318 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Vmn1r45Q8VIC7 318 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dcbld2Q91ZV3 769 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr878Q9EQA9 314 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm21738J3QP72 227 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rab1AP62821 205 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Asb13Q8VBX0 278 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr642Q924X8 314 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms