RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Wdr92Q8BGF3 357 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Sec22aQ8BH47 307 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 F830045P16RikQ8BJ95 487 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Arpc5Q9CPW4 151 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Tmem42Q9CR22 157 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Cmtm2aQ9DAR1 169 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 RetnlaQ9EP95 111 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Fzd5Q9EQD0 585 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Irak1bp1Q9ESJ7 259 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 PbkQ9JJ78 330 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Atxn7l3A2AWT3 347 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm14597A2CFG5 200 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Adamtsl5D3Z689 485 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Vmn1r7E9Q8T0 311 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 KitlgP20826 273 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Bmp8bP55105 399 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Taf13P61216 124 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm13199Q8C8E0 125 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Krtcap3Q8K177 240 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 FntbQ8K2I1 437 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Lin28aQ8K3Y3 209 aaKnown RBP13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Neil1Q8K4Q6 389 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Pdcd10Q8VE70 212 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr1495Q8VEZ4 319 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr1347Q8VF33 319 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Ddit4lQ8VHZ5 193 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Adipor1Q91VH1 375 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Rp2Q9EPK2 347 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Ccdc166S4R181 449 aa13.44□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm29276A0A087WNW5 222 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm20792A0A087WRF5 222 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm28490A0A087WRT9 222 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm21996A0A087WSS9 222 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm4881A0A140LIR9 352 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 BC051665E9Q623 330 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Slc17a3G3UWD9 498 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Zfp27P10077 819 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 LcatP16301 438 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Fcgr1P26151 404 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Tnfrsf4P47741 272 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Rpa2Q62193 270 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr1133Q7TR44 313 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Cggbp1Q8BHG9 167 aaKnown RBP13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Slc27a4Q91VE0 643 aaKnown RBP13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 PigkQ9CXY9 395 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Asb12Q9D738 308 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Ap1s2Q9DB50 160 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 9530002B09RikQ9EPV7 135 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Paqr4Q9JJE4 273 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm21294A0A087WS79 222 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm13090A2A899 111 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Tmem185aA2AF53 350 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Birc7A2AWP0 285 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Bbip1J3QMK2 67 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm8356J3QPD3 205 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 GzmmO08643 264 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Ier2P17950 221 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Myf5P24699 255 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 RoraP51448 523 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 ElocP83940 112 aaKnown RBP13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Rpusd3Q14AI6 344 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Foxr2Q3UM89 302 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Mfsd4b3Q3UN21 355 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Doxl2Q6IMK7 723 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Oxa1lQ8BGA9 433 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 LmlnQ8BMN4 681 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Znf436Q8BPP0 452 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Vmn1r230Q8R2A2 316 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Abhd6Q8R2Y0 336 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Mfsd4b1Q8VCV9 425 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr1512Q8VF72 313 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Zfp959Q91VM8 539 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Tlnrd1Q9ERE8 362 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Tspan32Q9JHH2 256 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Ak3Q9WTP7 227 aa13.43□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm21497A0A087WRK3 222 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr1039A2ARY0 319 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Rnaset2aC0HKG5 259 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Rnaset2bC0HKG6 259 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gm21976J3QNN2 249 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Vmn1r103K7N6X7 305 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Vmn1r122K7N726 305 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Vmn1r151L7N288 305 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Gabrg2P22723 474 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Rab3aP63011 220 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Npas1P97459 594 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 A4gntQ14BT6 341 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Cyb5d2Q5SSH8 263 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 ArhgdibQ61599 200 aaKnown RBP13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr1212Q7TR08 311 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Zer1Q80ZJ6 779 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Slc25a44Q8BGF9 314 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Adprhl1Q8BGK2 353 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Ankrd34cQ8BLB8 534 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Slc35f4Q8BZK4 485 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr836Q8VFJ3 317 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Olfr134Q8VG95 312 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Tex12Q9CR81 123 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Erv3Q9DAX3 200 aa13.42□□□□□ -0.26
Nup54-201ENSMUST00000038514 Mmp27D3YV89 551 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms