RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Csnk1eQ9JMK2 416 aaKnown RBP14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Spint2Q9WU03 252 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Cabin1G3X8Q1 2187 aaKnown RBP14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn2r16E9Q025 850 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Prr23a1G3UW32 258 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn2r28L7N203 852 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Il5P04401 133 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Lyl1P27792 278 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Gpr83P30731 423 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Abcd3P55096 659 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Tmem14aP56983 99 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 MestQ07646 335 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Hormad2Q5SQP1 306 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr140Q60878 302 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1282Q7TQY5 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1281Q7TQY6 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Ankrd34cQ8BLB8 534 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Nhlrc2Q8BZW8 725 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Tmem150cQ8C8S3 249 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Pdcd10Q8VE70 212 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 EurlQ9D7G4 290 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Arfgap3Q9D8S3 523 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 PbkQ9JJ78 330 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Paqr4Q9JJE4 273 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 FrylF8VQ05 3007 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Sdk2Q6V4S5 2176 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm4177D3YTX5 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr571E9Q407 322 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Wdfy1E9Q4P1 410 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Lipo5F6QKH6 233 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm5916G5E8W5 102 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm21767J3QPV5 180 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn1r127K7N6J5 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn1r142K7N6U0 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn1r159K7N701 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 GzmmO08643 264 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 MpoP11247 718 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 PkiaP63248 76 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Tas2r136Q7TQA8 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1287Q7TQY1 305 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 SdhaQ8K2B3 664 aaKnown RBP14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr291Q8VF60 317 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Ufsp2Q99K23 461 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Supt7lQ9CZV5 412 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Dpep3Q9DA79 493 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Cdc40Q9DC48 579 aaKnown RBP14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 P2rx4Q9JJX6 388 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Foxo1Q9R1E0 652 aa14.71□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr750E9Q0Z1 331 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Klf16P58334 251 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Q3U6N9 222 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Dhrs9Q58NB6 319 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr1087Q7TR63 313 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr479Q7TRV1 327 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr800Q8VFH7 311 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Ubqln4Q99NB8 596 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Prr32A2AFE9 284 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm20489A2AGH5 449 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 6330409D20RikA2AK85 162 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Mptx2D3YYJ7 219 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Ccl22O88430 92 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Aldh3a2P47740 484 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Fv1P70213 459 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Elavl1P70372 326 aaKnown RBP14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Ptpn21Q62136 1176 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Wbp1lQ8BGW2 348 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Katnal1Q8K0T4 488 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Syngr3Q8R191 229 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr410Q8VFX7 315 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr402Q8VFX8 315 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Xrcc2Q9CX47 278 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Cyc1Q9D0M3 325 aaKnown RBP14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Lancl2Q9JJK2 450 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Nkain4Q9JMG4 208 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 ClnkQ9QZE2 435 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Znf346Q9R0B7 294 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr65A0A1B0GSF4 315 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Tmem185aA2AF53 350 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Cisd3B1AR13 137 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 IqckD3YYL3 290 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm3685J3QPP2 205 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Sult2a5K7N6K9 285 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 DhodhO35435 395 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 CfdP03953 259 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Camk2bP28652 542 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Prss48Q14B25 312 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm10912Q3UXH0 145 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr205Q7TS37 305 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Fam212bQ80VY2 300 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Pck2Q8BH04 640 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Med30Q9CQI9 178 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Emc4Q9CZX9 183 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 BvesQ9ES83 358 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 Il36aQ9JLA2 160 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 SclyQ9JLI6 432 aa14.7□□□□□ -0.06
Shh-201ENSMUST00000002708 AspmQ8CJ27 3122 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Lama1P19137 3084 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Rhox3gB9EJQ9 160 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 4930522L14RikE9QAG4 666 aa14.69□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms