RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W APN1P22936 367 aa3.58□□□□□ -1.84
SEC22YLR268W MBR1P23493 339 aa3.58□□□□□ -1.84
SEC22YLR268W PEX1P24004 1043 aa3.58□□□□□ -1.84
SEC22YLR268W UGP1P32861 499 aaKnown RBP3.58□□□□□ -1.84
SEC22YLR268W TY4A-JP47023 414 aa3.58□□□□□ -1.84
SEC22YLR268W ALY2P47029 1046 aa3.58□□□□□ -1.84
SEC22YLR268W TDA9Q04545 1251 aa3.58□□□□□ -1.84
SEC22YLR268W MIP6P38760 659 aaKnown RBP3.57□□□□□ -1.84
SEC22YLR268W MIT1P40002 666 aa3.57□□□□□ -1.84
SEC22YLR268W REC102Q02721 264 aa3.57□□□□□ -1.84
SEC22YLR268W YPL068CQ02749 293 aa3.57□□□□□ -1.84
SEC22YLR268W HFD1Q04458 532 aa3.57□□□□□ -1.84
SEC22YLR268W PHO5P00635 467 aa3.56□□□□□ -1.84
SEC22YLR268W STE12P13574 688 aa3.56□□□□□ -1.84
SEC22YLR268W RNR1P21524 888 aaKnown RBP3.56□□□□□ -1.84
SEC22YLR268W BET3P36149 193 aa3.56□□□□□ -1.84
SEC22YLR268W GID8P40208 455 aa3.56□□□□□ -1.84
SEC22YLR268W CCT5P40413 562 aaKnown RBP3.56□□□□□ -1.84
SEC22YLR268W BNA2P47125 453 aa3.56□□□□□ -1.84
SEC22YLR268W YGR151CP53287 111 aa3.56□□□□□ -1.84
SEC22YLR268W RAD4P14736 754 aa3.55□□□□□ -1.84
SEC22YLR268W PRP28P23394 588 aa3.55□□□□□ -1.84
SEC22YLR268W PER1P25625 357 aa3.55□□□□□ -1.84
SEC22YLR268W YMC1P32331 307 aa3.55□□□□□ -1.84
SEC22YLR268W PMC1P38929 1173 aaPredicted RBP3.55□□□□□ -1.84
SEC22YLR268W ULP2P40537 1034 aaPredicted RBP3.55□□□□□ -1.84
SEC22YLR268W YGR125WP53273 1036 aa3.55□□□□□ -1.84
SEC22YLR268W SPC98P53540 846 aa3.55□□□□□ -1.84
SEC22YLR268W MEP2P41948 499 aa3.54□□□□□ -1.84
SEC22YLR268W STP1Q00947 519 aa3.54□□□□□ -1.84
SEC22YLR268W ULA1Q12059 462 aa3.54□□□□□ -1.84
SEC22YLR268W BIT2P38346 545 aa3.53□□□□□ -1.84
SEC22YLR268W KSP1P38691 1029 aaKnown RBP3.53□□□□□ -1.84
SEC22YLR268W PIG2P40187 538 aa3.53□□□□□ -1.84
SEC22YLR268W TAX4P47030 604 aa3.53□□□□□ -1.84
SEC22YLR268W TIM54P47045 478 aa3.53□□□□□ -1.84
SEC22YLR268W NOP9P47077 666 aaKnown RBP3.53□□□□□ -1.84
SEC22YLR268W ASN1P49089 572 aaKnown RBP3.53□□□□□ -1.84
SEC22YLR268W THI22Q06490 572 aa3.53□□□□□ -1.84
SEC22YLR268W GEP3Q08622 556 aa3.53□□□□□ -1.84
SEC22YLR268W RAD18P10862 487 aa3.52□□□□□ -1.85
SEC22YLR268W BCS1P32839 456 aa3.52□□□□□ -1.85
SEC22YLR268W SEC6P32844 805 aa3.52□□□□□ -1.85
SEC22YLR268W HOT13P36078 116 aa3.52□□□□□ -1.85
SEC22YLR268W YHR020WP38708 688 aaKnown RBP3.52□□□□□ -1.85
SEC22YLR268W PSA1P41940 361 aaKnown RBP3.52□□□□□ -1.85
SEC22YLR268W YDL086WQ07505 273 aa3.52□□□□□ -1.85
SEC22YLR268W DIA2Q08496 732 aaPredicted RBP3.52□□□□□ -1.85
SEC22YLR268W TPK2P06245 380 aa3.51□□□□□ -1.85
SEC22YLR268W YFL052WP43551 465 aa3.51□□□□□ -1.85
SEC22YLR268W FLC1Q08967 793 aa3.51□□□□□ -1.85
SEC22YLR268W LAM4P38800 1345 aa3.5□□□□□ -1.85
SEC22YLR268W PAM1P37304 830 aaKnown RBP3.5□□□□□ -1.85
SEC22YLR268W CTP1P38152 299 aa3.5□□□□□ -1.85
SEC22YLR268W RSP5P39940 809 aaKnown RBP3.5□□□□□ -1.85
SEC22YLR268W YJL049WP47048 450 aa3.5□□□□□ -1.85
SEC22YLR268W RTA1P53047 317 aa3.5□□□□□ -1.85
SEC22YLR268W NOP7P53261 605 aaKnown RBP3.5□□□□□ -1.85
SEC22YLR268W CHS5Q12114 671 aaKnown RBP3.5□□□□□ -1.85
SEC22YLR268W STE4P18851 423 aa3.49□□□□□ -1.85
SEC22YLR268W MTC2P34246 357 aa3.49□□□□□ -1.85
SEC22YLR268W MCD4P36051 919 aa3.49□□□□□ -1.85
SEC22YLR268W YHR097CP38809 366 aaKnown RBP3.49□□□□□ -1.85
SEC22YLR268W PMT6P42934 759 aa3.49□□□□□ -1.85
SEC22YLR268W RSC8P43609 557 aaKnown RBP3.49□□□□□ -1.85
SEC22YLR268W YSH1Q06224 779 aaPredicted RBP3.49□□□□□ -1.85
SEC22YLR268W MDM20Q12387 796 aaKnown RBP3.49□□□□□ -1.85
SEC22YLR268W CAN1P04817 590 aa3.48□□□□□ -1.85
SEC22YLR268W APL3P38065 1025 aa3.48□□□□□ -1.85
SEC22YLR268W IRC8P47046 822 aa3.48□□□□□ -1.85
SEC22YLR268W MPS3P47069 682 aa3.48□□□□□ -1.85
SEC22YLR268W NPY1P53164 384 aa3.48□□□□□ -1.85
SEC22YLR268W YDR179W-AQ03983 463 aa3.48□□□□□ -1.85
SEC22YLR268W IRC3Q06683 689 aa3.48□□□□□ -1.85
SEC22YLR268W RKI1Q12189 258 aa3.48□□□□□ -1.85
SEC22YLR268W ECM3Q99252 613 aa3.48□□□□□ -1.85
SEC22YLR268W Q0142Q9ZZW4 58 aa3.48□□□□□ -1.85
SEC22YLR268W YEL1P34225 687 aa3.47□□□□□ -1.85
SEC22YLR268W YKR018CP36114 725 aa3.47□□□□□ -1.85
SEC22YLR268W NMA2P53204 395 aa3.47□□□□□ -1.85
SEC22YLR268W ARG7Q04728 441 aa3.47□□□□□ -1.85
SEC22YLR268W ORM2Q06144 216 aa3.47□□□□□ -1.85
SEC22YLR268W GAL11P19659 1081 aa3.46□□□□□ -1.86
SEC22YLR268W ECM32P32644 1121 aaKnown RBP3.46□□□□□ -1.86
SEC22YLR268W RPN10P38886 268 aaKnown RBP3.46□□□□□ -1.86
SEC22YLR268W KHA1P40309 873 aa3.46□□□□□ -1.86
SEC22YLR268W PCL10P53124 433 aa3.46□□□□□ -1.86
SEC22YLR268W COX18P53239 316 aa3.46□□□□□ -1.86
SEC22YLR268W AI5_ALPHAQ9ZZX1 630 aa3.46□□□□□ -1.86
SEC22YLR268W FEN2P25621 512 aaKnown RBP3.45□□□□□ -1.86
SEC22YLR268W NTH1P32356 751 aa3.45□□□□□ -1.86
SEC22YLR268W YKR051WP36142 418 aa3.45□□□□□ -1.86
SEC22YLR268W PIP2P52960 996 aa3.45□□□□□ -1.86
SEC22YLR268W NGL2Q03264 515 aaKnown RBP3.45□□□□□ -1.86
SEC22YLR268W RPN7Q06103 429 aaKnown RBP3.45□□□□□ -1.86
SEC22YLR268W MSS1P32559 526 aaPredicted RBP3.44□□□□□ -1.86
SEC22YLR268W STO1P34160 861 aaKnown RBP3.44□□□□□ -1.86
SEC22YLR268W RFX1P48743 811 aa3.44□□□□□ -1.86
SEC22YLR268W YGL117WP53133 265 aa3.44□□□□□ -1.86
SEC22YLR268W SNF12P53628 566 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms