RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	SPC98	P53540	846 aa		4.7	□□□□□ -1.66
HMRA1	YCR097W	RAD4	P14736	754 aa		4.69	□□□□□ -1.66
HMRA1	YCR097W	YMC1	P32331	307 aa		4.69	□□□□□ -1.66
HMRA1	YCR097W	UGP1	P32861	499 aa	Known RBP	4.69	□□□□□ -1.66
HMRA1	YCR097W	RGT1	P32862	1170 aa		4.69	□□□□□ -1.66
HMRA1	YCR097W	YGR125W	P53273	1036 aa		4.69	□□□□□ -1.66
HMRA1	YCR097W	YGR151C	P53287	111 aa		4.69	□□□□□ -1.66
HMRA1	YCR097W	BET3	P36149	193 aa		4.68	□□□□□ -1.66
HMRA1	YCR097W	PMC1	P38929	1173 aa	Predicted RBP	4.68	□□□□□ -1.66
HMRA1	YCR097W	MIT1	P40002	666 aa		4.68	□□□□□ -1.66
HMRA1	YCR097W	RNR1	P21524	888 aa	Known RBP	4.67	□□□□□ -1.66
HMRA1	YCR097W	PEX1	P24004	1043 aa		4.67	□□□□□ -1.66
HMRA1	YCR097W	MIP6	P38760	659 aa	Known RBP	4.67	□□□□□ -1.66
HMRA1	YCR097W	TAX4	P47030	604 aa		4.67	□□□□□ -1.66
HMRA1	YCR097W	REC102	Q02721	264 aa		4.67	□□□□□ -1.66
HMRA1	YCR097W	HMO1	Q03973	246 aa	Known RBP	4.67	□□□□□ -1.66
HMRA1	YCR097W	PHO5	P00635	467 aa		4.66	□□□□□ -1.66
HMRA1	YCR097W	MEP2	P41948	499 aa		4.66	□□□□□ -1.66
HMRA1	YCR097W	BNA2	P47125	453 aa		4.66	□□□□□ -1.66
HMRA1	YCR097W	HFD1	Q04458	532 aa		4.66	□□□□□ -1.66
HMRA1	YCR097W	ABF1	P14164	731 aa		4.65	□□□□□ -1.67
HMRA1	YCR097W	MBR1	P23493	339 aa		4.65	□□□□□ -1.67
HMRA1	YCR097W	KSP1	P38691	1029 aa	Known RBP	4.65	□□□□□ -1.67
HMRA1	YCR097W	BMS1	Q08965	1183 aa	Known RBP	4.65	□□□□□ -1.67
HMRA1	YCR097W	CCT5	P40413	562 aa	Known RBP	4.64	□□□□□ -1.67
HMRA1	YCR097W	ASN1	P49089	572 aa	Known RBP	4.64	□□□□□ -1.67
HMRA1	YCR097W	YPL068C	Q02749	293 aa		4.64	□□□□□ -1.67
HMRA1	YCR097W	GEP3	Q08622	556 aa		4.64	□□□□□ -1.67
HMRA1	YCR097W	ULA1	Q12059	462 aa		4.64	□□□□□ -1.67
HMRA1	YCR097W	BCS1	P32839	456 aa		4.63	□□□□□ -1.67
HMRA1	YCR097W	YFL052W	P43551	465 aa		4.63	□□□□□ -1.67
HMRA1	YCR097W	TIM54	P47045	478 aa		4.63	□□□□□ -1.67
HMRA1	YCR097W	NOP9	P47077	666 aa	Known RBP	4.63	□□□□□ -1.67
HMRA1	YCR097W	STP1	Q00947	519 aa		4.63	□□□□□ -1.67
HMRA1	YCR097W	YDL086W	Q07505	273 aa		4.63	□□□□□ -1.67
HMRA1	YCR097W	PRP28	P23394	588 aa		4.62	□□□□□ -1.67
HMRA1	YCR097W	YHR097C	P38809	366 aa	Known RBP	4.62	□□□□□ -1.67
HMRA1	YCR097W	RSP5	P39940	809 aa	Known RBP	4.62	□□□□□ -1.67
HMRA1	YCR097W	ULP2	P40537	1034 aa	Predicted RBP	4.62	□□□□□ -1.67
HMRA1	YCR097W	Q0142	Q9ZZW4	58 aa		4.62	□□□□□ -1.67
HMRA1	YCR097W	BIT2	P38346	545 aa		4.61	□□□□□ -1.67
HMRA1	YCR097W	YHR020W	P38708	688 aa	Known RBP	4.61	□□□□□ -1.67
HMRA1	YCR097W	PIG2	P40187	538 aa		4.61	□□□□□ -1.67
HMRA1	YCR097W	RTA1	P53047	317 aa		4.61	□□□□□ -1.67
HMRA1	YCR097W	DIA2	Q08496	732 aa	Predicted RBP	4.61	□□□□□ -1.67
HMRA1	YCR097W	FLC1	Q08967	793 aa		4.61	□□□□□ -1.67
HMRA1	YCR097W	HOT13	P36078	116 aa		4.6	□□□□□ -1.67
HMRA1	YCR097W	GID8	P40208	455 aa		4.6	□□□□□ -1.67
HMRA1	YCR097W	NMA2	P53204	395 aa		4.6	□□□□□ -1.67
HMRA1	YCR097W	THI22	Q06490	572 aa		4.6	□□□□□ -1.67
HMRA1	YCR097W	LAM4	P38800	1345 aa		4.6	□□□□□ -1.67
HMRA1	YCR097W	RAD18	P10862	487 aa		4.59	□□□□□ -1.67
HMRA1	YCR097W	PSA1	P41940	361 aa	Known RBP	4.59	□□□□□ -1.67
HMRA1	YCR097W	COX18	P53239	316 aa		4.59	□□□□□ -1.67
HMRA1	YCR097W	CHS5	Q12114	671 aa	Known RBP	4.59	□□□□□ -1.67
HMRA1	YCR097W	ECM3	Q99252	613 aa		4.59	□□□□□ -1.67
HMRA1	YCR097W	RSC8	P43609	557 aa	Known RBP	4.58	□□□□□ -1.68
HMRA1	YCR097W	NPY1	P53164	384 aa		4.58	□□□□□ -1.68
HMRA1	YCR097W	MDM20	Q12387	796 aa	Known RBP	4.58	□□□□□ -1.68
HMRA1	YCR097W	CAN1	P04817	590 aa		4.57	□□□□□ -1.68
HMRA1	YCR097W	TPK2	P06245	380 aa		4.57	□□□□□ -1.68
HMRA1	YCR097W	SEC6	P32844	805 aa		4.57	□□□□□ -1.68
HMRA1	YCR097W	APL3	P38065	1025 aa		4.57	□□□□□ -1.68
HMRA1	YCR097W	MTC2	P34246	357 aa		4.56	□□□□□ -1.68
HMRA1	YCR097W	MCD4	P36051	919 aa		4.56	□□□□□ -1.68
HMRA1	YCR097W	CTP1	P38152	299 aa		4.56	□□□□□ -1.68
HMRA1	YCR097W	MPS3	P47069	682 aa		4.56	□□□□□ -1.68
HMRA1	YCR097W	ARG7	Q04728	441 aa		4.56	□□□□□ -1.68
HMRA1	YCR097W	STE4	P18851	423 aa		4.55	□□□□□ -1.68
HMRA1	YCR097W	RPN10	P38886	268 aa	Known RBP	4.55	□□□□□ -1.68
HMRA1	YCR097W	YNL195C	P40168	261 aa		4.55	□□□□□ -1.68
HMRA1	YCR097W	KHA1	P40309	873 aa		4.55	□□□□□ -1.68
HMRA1	YCR097W	PMT6	P42934	759 aa		4.55	□□□□□ -1.68
HMRA1	YCR097W	SNU71	P53207	620 aa	Known RBP	4.55	□□□□□ -1.68
HMRA1	YCR097W	AI5_ALPHA	Q9ZZX1	630 aa		4.55	□□□□□ -1.68
HMRA1	YCR097W	YSH1	Q06224	779 aa	Predicted RBP	4.54	□□□□□ -1.68
HMRA1	YCR097W	RKI1	Q12189	258 aa		4.54	□□□□□ -1.68
HMRA1	YCR097W	FEN2	P25621	512 aa	Known RBP	4.53	□□□□□ -1.68
HMRA1	YCR097W	YKR051W	P36142	418 aa		4.53	□□□□□ -1.68
HMRA1	YCR097W	IRC8	P47046	822 aa		4.53	□□□□□ -1.68
HMRA1	YCR097W	YDR179W-A	Q03983	463 aa		4.53	□□□□□ -1.68
HMRA1	YCR097W	ORM2	Q06144	216 aa		4.53	□□□□□ -1.68
HMRA1	YCR097W	AAD3	P25612	363 aa		4.52	□□□□□ -1.69
HMRA1	YCR097W	RFX1	P48743	811 aa		4.52	□□□□□ -1.69
HMRA1	YCR097W	PIP2	P52960	996 aa		4.52	□□□□□ -1.69
HMRA1	YCR097W	DIP5	P53388	608 aa		4.52	□□□□□ -1.69
HMRA1	YCR097W	NGL2	Q03264	515 aa	Known RBP	4.52	□□□□□ -1.69
HMRA1	YCR097W	RPN7	Q06103	429 aa	Known RBP	4.52	□□□□□ -1.69
HMRA1	YCR097W	ECM32	P32644	1121 aa	Known RBP	4.51	□□□□□ -1.69
HMRA1	YCR097W	YEL1	P34225	687 aa		4.51	□□□□□ -1.69
HMRA1	YCR097W	YKR018C	P36114	725 aa		4.51	□□□□□ -1.69
HMRA1	YCR097W	PCL10	P53124	433 aa		4.51	□□□□□ -1.69
HMRA1	YCR097W	LEE1	Q02799	301 aa	Known RBP	4.51	□□□□□ -1.69
HMRA1	YCR097W	VBA3	P25594	458 aa		4.5	□□□□□ -1.69
HMRA1	YCR097W	STO1	P34160	861 aa	Known RBP	4.5	□□□□□ -1.69
HMRA1	YCR097W	HUL5	P53119	910 aa		4.5	□□□□□ -1.69
HMRA1	YCR097W	YGL117W	P53133	265 aa		4.5	□□□□□ -1.69
HMRA1	YCR097W	MIH1	P23748	554 aa		4.49	□□□□□ -1.69
HMRA1	YCR097W	MSS1	P32559	526 aa	Predicted RBP	4.49	□□□□□ -1.69
HMRA1	YCR097W	YIL077C	P40508	320 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 42 ms