RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MEIS3Q99687 375 aa21.22■□□□□ 0.99
PHGDH-234ENST00000642041 ERVV-1B6SEH8 477 aa21.21■□□□□ 0.99
PHGDH-234ENST00000642041 RAB11FIP3O75154 756 aa21.21■□□□□ 0.99
PHGDH-234ENST00000642041 FXR1P51114 621 aaKnown RBP eCLIP21.21■□□□□ 0.99
PHGDH-234ENST00000642041 XAGE3Q8WTP9 111 aa21.21■□□□□ 0.99
PHGDH-234ENST00000642041 DPF2Q92785 391 aa21.21■□□□□ 0.99
PHGDH-234ENST00000642041 USP44Q9H0E7 712 aa21.21■□□□□ 0.99
PHGDH-234ENST00000642041 ANP32AP39687 249 aaKnown RBP21.2■□□□□ 0.98
PHGDH-234ENST00000642041 ANKRD45Q5TZF3 282 aa21.2■□□□□ 0.98
PHGDH-234ENST00000642041 LRP10Q7Z4F1 713 aa21.2■□□□□ 0.98
PHGDH-234ENST00000642041 PLBD2Q8NHP8 589 aa21.2■□□□□ 0.98
PHGDH-234ENST00000642041 UPF2Q9HAU5 1272 aaKnown RBP21.2■□□□□ 0.98
PHGDH-234ENST00000642041 C9orf78Q9NZ63 289 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-234ENST00000642041 MAP3K2Q9Y2U5 619 aa21.2■□□□□ 0.98
PHGDH-234ENST00000642041 FBXO46Q6PJ61 603 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-234ENST00000642041 DPP8Q6V1X1 898 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-234ENST00000642041 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
PHGDH-234ENST00000642041 SAMD7Q7Z3H4 446 aa21.19■□□□□ 0.98
PHGDH-234ENST00000642041 ZNF296Q8WUU4 475 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-234ENST00000642041 METTL22Q9BUU2 404 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-234ENST00000642041 UTYO14607 1347 aa21.19■□□□□ 0.98
PHGDH-234ENST00000642041 NUP98P52948 1817 aa21.18■□□□□ 0.98
PHGDH-234ENST00000642041 SUSD4Q5VX71 490 aa21.18■□□□□ 0.98
PHGDH-234ENST00000642041 C3orf67Q6ZVT6 689 aa21.18■□□□□ 0.98
PHGDH-234ENST00000642041 COPS6Q7L5N1 327 aa21.18■□□□□ 0.98
PHGDH-234ENST00000642041 DCPSQ96C86 337 aaKnown RBP21.18■□□□□ 0.98
PHGDH-234ENST00000642041 YDJCA8MPS7 323 aa21.17■□□□□ 0.98
PHGDH-234ENST00000642041 ADM5C9JUS6 153 aa21.17■□□□□ 0.98
PHGDH-234ENST00000642041 AIMP1Q12904 312 aaKnown RBP21.17■□□□□ 0.98
PHGDH-234ENST00000642041 MTX1Q13505 466 aa21.17■□□□□ 0.98
PHGDH-234ENST00000642041 SIRT2Q8IXJ6 389 aa21.17■□□□□ 0.98
PHGDH-234ENST00000642041 MPNDQ8N594 471 aa21.17■□□□□ 0.98
PHGDH-234ENST00000642041 UBN2Q6ZU65 1347 aa21.17■□□□□ 0.98
PHGDH-234ENST00000642041 MAP3K15Q6ZN16 1313 aa21.16■□□□□ 0.98
PHGDH-234ENST00000642041 TBC1D10BQ4KMP7 808 aaPredicted RBP21.16■□□□□ 0.98
PHGDH-234ENST00000642041 RASAL3Q86YV0 1011 aa21.16■□□□□ 0.98
PHGDH-234ENST00000642041 SP8Q8IXZ3 490 aa21.16■□□□□ 0.98
PHGDH-234ENST00000642041 NLRP3Q96P20 1036 aa21.16■□□□□ 0.98
PHGDH-234ENST00000642041 ZBTB12Q9Y330 459 aaPredicted RBP21.16■□□□□ 0.98
PHGDH-234ENST00000642041 NTSR2O95665 410 aa21.15■□□□□ 0.98
PHGDH-234ENST00000642041 GPTP24298 496 aa21.15■□□□□ 0.98
PHGDH-234ENST00000642041 NOM1Q5C9Z4 860 aaKnown RBP21.15■□□□□ 0.98
PHGDH-234ENST00000642041 SSH3Q8TE77 659 aa21.15■□□□□ 0.98
PHGDH-234ENST00000642041 GRM8O00222 908 aa21.14■□□□□ 0.97
PHGDH-234ENST00000642041 BBOX1O75936 387 aa21.14■□□□□ 0.97
PHGDH-234ENST00000642041 EGFRP00533 1210 aa21.14■□□□□ 0.97
PHGDH-234ENST00000642041 HSP90AB3PQ58FF7 597 aa21.14■□□□□ 0.97
PHGDH-234ENST00000642041 BMP2KLQ5H9B9 411 aa21.14■□□□□ 0.97
PHGDH-234ENST00000642041 ERC1Q8IUD2 1116 aa21.14■□□□□ 0.97
PHGDH-234ENST00000642041 C1orf115Q9H7X2 142 aa21.14■□□□□ 0.97
PHGDH-234ENST00000642041 TBC1D8O95759 1140 aa21.13■□□□□ 0.97
PHGDH-234ENST00000642041 ZNF34Q8IZ26 560 aa21.13■□□□□ 0.97
PHGDH-234ENST00000642041 DDRGK1Q96HY6 314 aa21.13■□□□□ 0.97
PHGDH-234ENST00000642041 PSMD14O00487 310 aa21.12■□□□□ 0.97
PHGDH-234ENST00000642041 SULF1Q8IWU6 871 aa21.12■□□□□ 0.97
PHGDH-234ENST00000642041 GPR25O00155 361 aa21.11■□□□□ 0.97
PHGDH-234ENST00000642041 RPS12P25398 132 aaKnown RBP21.11■□□□□ 0.97
PHGDH-234ENST00000642041 POLA2Q14181 598 aa21.11■□□□□ 0.97
PHGDH-234ENST00000642041 SLC10A5Q5PT55 438 aa21.11■□□□□ 0.97
PHGDH-234ENST00000642041 TTLL7Q6ZT98 887 aa21.11■□□□□ 0.97
PHGDH-234ENST00000642041 PPP1R42Q7Z4L9 355 aa21.11■□□□□ 0.97
PHGDH-234ENST00000642041 LRRCC1Q9C099 1032 aa21.11■□□□□ 0.97
PHGDH-234ENST00000642041 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
PHGDH-234ENST00000642041 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
PHGDH-234ENST00000642041 RBM26Q5T8P6 1007 aaKnown RBP21.1■□□□□ 0.97
PHGDH-234ENST00000642041 CCDC191Q8NCU4 936 aa21.1■□□□□ 0.97
PHGDH-234ENST00000642041 CDCA5Q96FF9 252 aa21.1■□□□□ 0.97
PHGDH-234ENST00000642041 LNPKQ9C0E8 428 aa21.1■□□□□ 0.97
PHGDH-234ENST00000642041 HTTP42858 3142 aa21.1■□□□□ 0.97
PHGDH-234ENST00000642041 NEURL1BA8MQ27 555 aa21.09■□□□□ 0.97
PHGDH-234ENST00000642041 FKBP1BP68106 108 aa21.09■□□□□ 0.97
PHGDH-234ENST00000642041 GCKRQ14397 625 aa21.09■□□□□ 0.97
PHGDH-234ENST00000642041 C8orf34Q49A92 452 aa21.09■□□□□ 0.97
PHGDH-234ENST00000642041 OSBPL3Q9H4L5 887 aa21.09■□□□□ 0.97
PHGDH-234ENST00000642041 ZBTB3Q9H5J0 574 aa21.09■□□□□ 0.97
PHGDH-234ENST00000642041 KIAA0100Q14667 2235 aaKnown RBP21.09■□□□□ 0.97
PHGDH-234ENST00000642041 PARP10Q53GL7 1025 aa21.08■□□□□ 0.97
PHGDH-234ENST00000642041 KIF1BPQ96EK5 621 aa21.08■□□□□ 0.97
PHGDH-234ENST00000642041 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.97
PHGDH-234ENST00000642041 AOX1Q06278 1338 aa21.07■□□□□ 0.96
PHGDH-234ENST00000642041 HSP90B1P14625 803 aaKnown RBP21.07■□□□□ 0.96
PHGDH-234ENST00000642041 TM4SF4P48230 202 aa21.07■□□□□ 0.96
PHGDH-234ENST00000642041 KIF4BQ2VIQ3 1234 aa21.07■□□□□ 0.96
PHGDH-234ENST00000642041 CASC1Q6TDU7 716 aa21.07■□□□□ 0.96
PHGDH-234ENST00000642041 MYD88Q99836 296 aa21.07■□□□□ 0.96
PHGDH-234ENST00000642041 GGA3Q9NZ52 723 aa21.07■□□□□ 0.96
PHGDH-234ENST00000642041 SZT2Q5T011 3432 aa21.07■□□□□ 0.96
PHGDH-234ENST00000642041 CENPFP49454 3210 aa21.06■□□□□ 0.96
PHGDH-234ENST00000642041 ANKRD36CQ5JPF3 1778 aa21.06■□□□□ 0.96
PHGDH-234ENST00000642041 POTEFA5A3E0 1075 aa21.06■□□□□ 0.96
PHGDH-234ENST00000642041 SRGAP3O43295 1099 aa21.06■□□□□ 0.96
PHGDH-234ENST00000642041 FKTNO75072 461 aa21.06■□□□□ 0.96
PHGDH-234ENST00000642041 GIGYF2Q6Y7W6 1299 aaKnown RBP21.06■□□□□ 0.96
PHGDH-234ENST00000642041 NBPF7P0C2Y1 421 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-234ENST00000642041 UTP14AQ9BVJ6 771 aaKnown RBP21.05■□□□□ 0.96
PHGDH-234ENST00000642041 CWC25Q9NXE8 425 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-234ENST00000642041 TRIOBPQ9H2D6 2365 aa21.04■□□□□ 0.96
PHGDH-234ENST00000642041 DLL1O00548 723 aa21.04■□□□□ 0.96
PHGDH-234ENST00000642041 WASHC4Q2M389 1173 aa21.04■□□□□ 0.96
PHGDH-234ENST00000642041 IL27Q8NEV9 243 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms