RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SALL3Q9BXA9 1300 aa21.39■■□□□ 1.01
PHGDH-230ENST00000641927 CCDC158Q5M9N0 1113 aa21.38■■□□□ 1.01
PHGDH-230ENST00000641927 C7orf43Q8WVR3 580 aa21.38■■□□□ 1.01
PHGDH-230ENST00000641927 PODXL2Q9NZ53 605 aa21.38■■□□□ 1.01
PHGDH-230ENST00000641927 CC2D2BQ6DHV5 1058 aa21.37■■□□□ 1.01
PHGDH-230ENST00000641927 TBC1D16Q8TBP0 767 aa21.37■■□□□ 1.01
PHGDH-230ENST00000641927 GPR101Q96P66 508 aaPredicted RBP21.37■■□□□ 1.01
PHGDH-230ENST00000641927 TTC41PQ6P2S7 1318 aa21.37■■□□□ 1.01
PHGDH-230ENST00000641927 TTC39AQ5SRH9 613 aa21.37■■□□□ 1.01
PHGDH-230ENST00000641927 SYT17Q9BSW7 474 aa21.37■■□□□ 1.01
PHGDH-230ENST00000641927 STAP2Q9UGK3 403 aa21.37■■□□□ 1.01
PHGDH-230ENST00000641927 POLLQ9UGP5 575 aa21.37■■□□□ 1.01
PHGDH-230ENST00000641927 ERC2O15083 957 aa21.36■■□□□ 1.01
PHGDH-230ENST00000641927 KLRK1P26718 216 aa21.36■■□□□ 1.01
PHGDH-230ENST00000641927 CCDC93Q567U6 631 aa21.36■■□□□ 1.01
PHGDH-230ENST00000641927 CAVIN4Q5BKX8 364 aa21.36■■□□□ 1.01
PHGDH-230ENST00000641927 VPS37DQ86XT2 251 aa21.36■■□□□ 1.01
PHGDH-230ENST00000641927 GYG1P46976 350 aa21.35■■□□□ 1.01
PHGDH-230ENST00000641927 OSBPL3Q9H4L5 887 aa21.35■■□□□ 1.01
PHGDH-230ENST00000641927 BRCA1P38398 1863 aaKnown RBP21.35■■□□□ 1.01
PHGDH-230ENST00000641927 GLRX3O76003 335 aaKnown RBP21.34■■□□□ 1.01
PHGDH-230ENST00000641927 BCAMP50895 628 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 SOGA3Q5TF21 947 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 CCDC102BQ68D86 513 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 ARAP2Q8WZ64 1704 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 AOX1Q06278 1338 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 PHKA1P46020 1223 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 RTKN2Q8IZC4 609 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 PI4K2BQ8TCG2 481 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
PHGDH-230ENST00000641927 RIMBP2O15034 1052 aa21.33■■□□□ 1
PHGDH-230ENST00000641927 GRIPAP1Q4V328 841 aa21.33■■□□□ 1
PHGDH-230ENST00000641927 TTC22Q5TAA0 569 aa21.33■■□□□ 1
PHGDH-230ENST00000641927 LTBP1Q14766 1721 aa21.32■■□□□ 1
PHGDH-230ENST00000641927 ATP5JP18859 108 aa21.32■■□□□ 1
PHGDH-230ENST00000641927 TXNRD3Q86VQ6 643 aa21.32■■□□□ 1
PHGDH-230ENST00000641927 FAM84BQ96KN1 310 aaPredicted RBP21.32■■□□□ 1
PHGDH-230ENST00000641927 MAP4K4O95819 1239 aaPredicted RBP21.31■■□□□ 1
PHGDH-230ENST00000641927 HIBADHP31937 336 aaKnown RBP21.31■■□□□ 1
PHGDH-230ENST00000641927 EYA3Q99504 573 aa21.31■■□□□ 1
PHGDH-230ENST00000641927 ZC3H12CQ9C0D7 883 aaKnown RBP21.31■■□□□ 1
PHGDH-230ENST00000641927 GNL3LQ9NVN8 582 aaKnown RBP21.31■■□□□ 1
PHGDH-230ENST00000641927 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
PHGDH-230ENST00000641927 TRIM6-TRIM34B2RNG4 842 aa21.31■■□□□ 1
PHGDH-230ENST00000641927 UQCRFS1P1P0C7P4 283 aa21.31■■□□□ 1
PHGDH-230ENST00000641927 WASHC4Q2M389 1173 aa21.31■■□□□ 1
PHGDH-230ENST00000641927 ZNF804AQ7Z570 1209 aa21.31■■□□□ 1
PHGDH-230ENST00000641927 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
PHGDH-230ENST00000641927 DNAJC2Q99543 621 aaKnown RBP21.31■■□□□ 1
PHGDH-230ENST00000641927 IQSEC3Q9UPP2 1182 aaPredicted RBP21.31■■□□□ 1
PHGDH-230ENST00000641927 MED23Q9ULK4 1368 aa21.3■■□□□ 1
PHGDH-230ENST00000641927 FRAT2O75474 233 aaPredicted RBP21.3■■□□□ 1
PHGDH-230ENST00000641927 GSPT1P15170 499 aaKnown RBP21.3■■□□□ 1
PHGDH-230ENST00000641927 PELP1Q8IZL8 1130 aaKnown RBP21.3■■□□□ 1
PHGDH-230ENST00000641927 IRS2Q9Y4H2 1338 aa21.29■■□□□ 1
PHGDH-230ENST00000641927 G3V3G9 751 aa21.29■■□□□ 1
PHGDH-230ENST00000641927 FKBP4Q02790 459 aaKnown RBP eCLIP21.29■■□□□ 1
PHGDH-230ENST00000641927 DCAF8Q5TAQ9 597 aa21.29■■□□□ 1
PHGDH-230ENST00000641927 C15orf52Q6ZUT6 534 aaKnown RBP21.29■■□□□ 1
PHGDH-230ENST00000641927 FBXO33Q7Z6M2 555 aa21.29■■□□□ 1
PHGDH-230ENST00000641927 RTFDC1Q9BY42 306 aaPredicted RBP21.29■■□□□ 1
PHGDH-230ENST00000641927 SNRKQ9NRH2 765 aa21.29■■□□□ 1
PHGDH-230ENST00000641927 NDUFB9Q9Y6M9 179 aa21.29■■□□□ 1
PHGDH-230ENST00000641927 SNED1Q8TER0 1413 aa21.28■■□□□ 1
PHGDH-230ENST00000641927 ARID4AP29374 1257 aaPredicted RBP21.28■■□□□ 1
PHGDH-230ENST00000641927 SCARF1Q14162 830 aa21.28■■□□□ 1
PHGDH-230ENST00000641927 BMP2KLQ5H9B9 411 aa21.28■■□□□ 1
PHGDH-230ENST00000641927 RILPL2Q969X0 211 aa21.28■■□□□ 1
PHGDH-230ENST00000641927 MCAMP43121 646 aa21.28■■□□□ 1
PHGDH-230ENST00000641927 ZNF512BQ96KM6 892 aaPredicted RBP21.28■■□□□ 1
PHGDH-230ENST00000641927 PSMD1Q99460 953 aa21.28■■□□□ 1
PHGDH-230ENST00000641927 HAUS7Q99871 368 aa21.28■■□□□ 1
PHGDH-230ENST00000641927 RASGRF1Q13972 1273 aa21.27■■□□□ 1
PHGDH-230ENST00000641927 PI16Q6UXB8 463 aa21.27■■□□□ 1
PHGDH-230ENST00000641927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.27■■□□□ 1
PHGDH-230ENST00000641927 AOC3Q16853 763 aa21.26■□□□□ 0.99
PHGDH-230ENST00000641927 TAOK3Q9H2K8 898 aa21.26■□□□□ 0.99
PHGDH-230ENST00000641927 GOLIM4O00461 696 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 PPIP5K2O43314 1243 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 SDSP20132 328 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 ZAP70P43403 619 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 DOK7Q18PE1 504 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 CNTROBQ8N137 903 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 SPATA5Q8NB90 893 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 CD209Q9NNX6 404 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 ZNF277Q9NRM2 450 aaPredicted RBP21.25■□□□□ 0.99
PHGDH-230ENST00000641927 HMG20BQ9P0W2 317 aa21.25■□□□□ 0.99
PHGDH-230ENST00000641927 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
PHGDH-230ENST00000641927 PAG1Q9NWQ8 432 aa21.24■□□□□ 0.99
PHGDH-230ENST00000641927 ARFGEF1Q9Y6D6 1849 aa21.24■□□□□ 0.99
PHGDH-230ENST00000641927 COA1Q9GZY4 146 aa21.24■□□□□ 0.99
PHGDH-230ENST00000641927 DENND2AQ9ULE3 1009 aa21.24■□□□□ 0.99
PHGDH-230ENST00000641927 SEMA3EO15041 775 aa21.23■□□□□ 0.99
PHGDH-230ENST00000641927 KIAA2012Q0VF49 1180 aa21.23■□□□□ 0.99
PHGDH-230ENST00000641927 CHAF1AQ13111 956 aaPredicted RBP21.23■□□□□ 0.99
PHGDH-230ENST00000641927 ARHGAP27Q6ZUM4 889 aa21.23■□□□□ 0.99
PHGDH-230ENST00000641927 EVI5LQ96CN4 794 aa21.23■□□□□ 0.99
PHGDH-230ENST00000641927 DBNDD1Q9H9R9 158 aa21.23■□□□□ 0.99
PHGDH-230ENST00000641927 NFKBIEO00221 500 aa21.22■□□□□ 0.99
PHGDH-230ENST00000641927 LARGE2Q8N3Y3 721 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms