RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FBXW7Q969H0 707 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 XAGE2Q96GT9 111 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 PSMD1Q99460 953 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 DLEC1Q9Y238 1755 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
PHGDH-220ENST00000641570 TIMM10P62072 90 aa15.81■□□□□ 0.12
PHGDH-220ENST00000641570 LARGE2Q8N3Y3 721 aa15.81■□□□□ 0.12
PHGDH-220ENST00000641570 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
PHGDH-220ENST00000641570 ECHDC1Q9NTX5 307 aa15.81■□□□□ 0.12
PHGDH-220ENST00000641570 MED23Q9ULK4 1368 aa15.81■□□□□ 0.12
PHGDH-220ENST00000641570 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
PHGDH-220ENST00000641570 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
PHGDH-220ENST00000641570 NIM1KQ8IY84 436 aa15.8■□□□□ 0.12
PHGDH-220ENST00000641570 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-220ENST00000641570 DBNDD2Q9BQY9 259 aa15.8■□□□□ 0.12
PHGDH-220ENST00000641570 VPS33BQ9H267 617 aa15.8■□□□□ 0.12
PHGDH-220ENST00000641570 GLRX3O76003 335 aaKnown RBP15.79■□□□□ 0.12
PHGDH-220ENST00000641570 COA1Q9GZY4 146 aa15.79■□□□□ 0.12
PHGDH-220ENST00000641570 POLLQ9UGP5 575 aa15.79■□□□□ 0.12
PHGDH-220ENST00000641570 FGFR2P21802 821 aa15.78■□□□□ 0.12
PHGDH-220ENST00000641570 GYG1P46976 350 aa15.78■□□□□ 0.12
PHGDH-220ENST00000641570 AOC3Q16853 763 aa15.78■□□□□ 0.12
PHGDH-220ENST00000641570 LRRFIP1Q32MZ4 808 aaKnown RBP15.78■□□□□ 0.12
PHGDH-220ENST00000641570 C7orf43Q8WVR3 580 aa15.78■□□□□ 0.12
PHGDH-220ENST00000641570 DNAJC2Q99543 621 aaKnown RBP15.78■□□□□ 0.12
PHGDH-220ENST00000641570 ZNF277Q9NRM2 450 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-220ENST00000641570 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
PHGDH-220ENST00000641570 DENND2AQ9ULE3 1009 aa15.78■□□□□ 0.12
PHGDH-220ENST00000641570 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
PHGDH-220ENST00000641570 AOX1Q06278 1338 aa15.77■□□□□ 0.12
PHGDH-220ENST00000641570 TRIM6-TRIM34B2RNG4 842 aa15.77■□□□□ 0.12
PHGDH-220ENST00000641570 SEMA3EO15041 775 aa15.77■□□□□ 0.12
PHGDH-220ENST00000641570 ADORA1P30542 326 aa15.77■□□□□ 0.12
PHGDH-220ENST00000641570 IARSP41252 1262 aaKnown RBP15.77■□□□□ 0.12
PHGDH-220ENST00000641570 CCDC102BQ68D86 513 aa15.77■□□□□ 0.12
PHGDH-220ENST00000641570 GPR101Q96P66 508 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-220ENST00000641570 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-220ENST00000641570 TLR7Q9NYK1 1049 aaKnown RBP15.77■□□□□ 0.12
PHGDH-220ENST00000641570 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
PHGDH-220ENST00000641570 SNAP23O00161 211 aa15.76■□□□□ 0.11
PHGDH-220ENST00000641570 BCAMP50895 628 aa15.76■□□□□ 0.11
PHGDH-220ENST00000641570 KIAA2012Q0VF49 1180 aa15.76■□□□□ 0.11
PHGDH-220ENST00000641570 CHAF1AQ13111 956 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-220ENST00000641570 C15orf52Q6ZUT6 534 aaKnown RBP15.76■□□□□ 0.11
PHGDH-220ENST00000641570 ZGPATQ8N5A5 531 aaKnown RBP15.76■□□□□ 0.11
PHGDH-220ENST00000641570 LRRC37AA6NMS7 1700 aa15.76■□□□□ 0.11
PHGDH-220ENST00000641570 LTBP3Q9NS15 1303 aa15.75■□□□□ 0.11
PHGDH-220ENST00000641570 ECE2O60344 883 aa15.75■□□□□ 0.11
PHGDH-220ENST00000641570 PDE1AP54750 535 aa15.75■□□□□ 0.11
PHGDH-220ENST00000641570 RASSF7Q02833 373 aa15.75■□□□□ 0.11
PHGDH-220ENST00000641570 TTF1Q15361 905 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-220ENST00000641570 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
PHGDH-220ENST00000641570 CASC1Q6TDU7 716 aa15.75■□□□□ 0.11
PHGDH-220ENST00000641570 C16orf71Q8IYS4 520 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-220ENST00000641570 CNTROBQ8N137 903 aa15.75■□□□□ 0.11
PHGDH-220ENST00000641570 TAF1P21675 1872 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 COL4A1P02462 1669 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 ATP5JP18859 108 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 LMNB1P20700 586 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 PHKA1P46020 1223 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 EIF6P56537 245 aaKnown RBP15.74■□□□□ 0.11
PHGDH-220ENST00000641570 PODNQ7Z5L7 613 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.74■□□□□ 0.11
PHGDH-220ENST00000641570 FAM84BQ96KN1 310 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-220ENST00000641570 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 IQSEC3Q9UPP2 1182 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-220ENST00000641570 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
PHGDH-220ENST00000641570 KLRK1P26718 216 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 ARID4AP29374 1257 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-220ENST00000641570 TSHZ3Q63HK5 1081 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 SPTY2D1Q68D10 685 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-220ENST00000641570 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 SPATA5Q8NB90 893 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 WDR66Q8TBY9 1149 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 TBC1D22AQ8WUA7 517 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 RILPL2Q969X0 211 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.73■□□□□ 0.111e-14■□□□□ 11
PHGDH-220ENST00000641570 CD209Q9NNX6 404 aa15.73■□□□□ 0.11
PHGDH-220ENST00000641570 NFKBIEO00221 500 aa15.72■□□□□ 0.11
PHGDH-220ENST00000641570 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.112e-7■□□□□ 10.4
PHGDH-220ENST00000641570 FBXO33Q7Z6M2 555 aa15.72■□□□□ 0.11
PHGDH-220ENST00000641570 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
PHGDH-220ENST00000641570 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-220ENST00000641570 ZNF512BQ96KM6 892 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-220ENST00000641570 RNF181Q9P0P0 153 aa15.72■□□□□ 0.11
PHGDH-220ENST00000641570 LRP2BPQ9P2M1 347 aa15.72■□□□□ 0.11
PHGDH-220ENST00000641570 STAP2Q9UGK3 403 aa15.72■□□□□ 0.11
PHGDH-220ENST00000641570 GOLIM4O00461 696 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 PDE4AP27815 886 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 TNIP1Q15025 636 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 ZSCAN25Q6NSZ9 544 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 FSD1Q9BTV5 496 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 OSBPL3Q9H4L5 887 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 PAG1Q9NWQ8 432 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 ABCF2Q9UG63 623 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 ZNRF3Q9ULT6 936 aa15.71■□□□□ 0.11
PHGDH-220ENST00000641570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms