RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 ZNF609O15014 1411 aa14.92□□□□□ -0.02
ERGIC3-220ENST00000640748 WTIPA6NIX2 430 aaPredicted RBP14.92□□□□□ -0.02
ERGIC3-220ENST00000640748 UFL1O94874 794 aa14.92□□□□□ -0.02
ERGIC3-220ENST00000640748 RGS19P49795 217 aa14.92□□□□□ -0.02
ERGIC3-220ENST00000640748 KIF4BQ2VIQ3 1234 aa14.92□□□□□ -0.02
ERGIC3-220ENST00000640748 CCDC191Q8NCU4 936 aa14.92□□□□□ -0.02
ERGIC3-220ENST00000640748 GBA2Q9HCG7 927 aaPredicted RBP14.92□□□□□ -0.02
ERGIC3-220ENST00000640748 POLR2AP24928 1970 aaKnown RBP14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 CCDC85CA6NKD9 419 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 ZNF280AP59817 542 aaPredicted RBP14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 RGMBQ6NW40 437 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 ITPRIPQ8IWB1 547 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 TMEM57Q8N5G2 664 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 DCPSQ96C86 337 aaKnown RBP14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 CCDC85AQ96PX6 553 aaPredicted RBP14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 GMLQ99445 158 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 METTL22Q9BUU2 404 aaPredicted RBP14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 ZC3H12CQ9C0D7 883 aaKnown RBP14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 MCOLN1Q9GZU1 580 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 CHMP4BQ9H444 224 aaKnown RBP14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 GGA3Q9NZ52 723 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 ANKIB1Q9P2G1 1089 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 GGA1Q9UJY5 639 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 CASP8AP2Q9UKL3 1982 aa14.91□□□□□ -0.02
ERGIC3-220ENST00000640748 PDE8AO60658 829 aa14.9□□□□□ -0.02
ERGIC3-220ENST00000640748 CCDC152Q4G0S7 254 aa14.9□□□□□ -0.02
ERGIC3-220ENST00000640748 CCDC30Q5VVM6 783 aa14.9□□□□□ -0.02
ERGIC3-220ENST00000640748 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
ERGIC3-220ENST00000640748 CWC25Q9NXE8 425 aaPredicted RBP14.9□□□□□ -0.02
ERGIC3-220ENST00000640748 PTPRCP08575 1304 aa14.9□□□□□ -0.02
ERGIC3-220ENST00000640748 IGKV5-2P06315 115 aa14.89□□□□□ -0.03
ERGIC3-220ENST00000640748 RSBN1LQ6PCB5 846 aaPredicted RBP14.89□□□□□ -0.03
ERGIC3-220ENST00000640748 STK31Q9BXU1 1019 aa14.89□□□□□ -0.03
ERGIC3-220ENST00000640748 HSP90B1P14625 803 aaKnown RBP14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 SCARF1Q14162 830 aa14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 C2orf69Q8N8R5 385 aa14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 AGBL3Q8NEM8 1001 aa14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 MAP3K2Q9Y2U5 619 aa14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 XDHP47989 1333 aa14.88□□□□□ -0.03
ERGIC3-220ENST00000640748 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 SLC10A3P09131 477 aa14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 ZNF157P51786 506 aaPredicted RBP14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 CTSWP56202 376 aa14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 ANGEL2Q5VTE6 544 aaKnown RBP14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 ANKRD18AQ8IVF6 992 aa14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 CCDC102AQ96A19 550 aa14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 TSHZ2Q9NRE2 1034 aa14.87□□□□□ -0.03
ERGIC3-220ENST00000640748 PI4KAP2A4QPH2 592 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 MLLT1Q03111 559 aaPredicted RBP14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 DGKZQ13574 1117 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 KSR2Q6VAB6 950 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 PI4KAP1Q8N8J0 262 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 TTLL11Q8NHH1 800 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 RWDD1Q9H446 243 aaPredicted RBP14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 RNF186Q9NXI6 227 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 SAGE1Q9NXZ1 904 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 PSME4Q14997 1843 aa14.86□□□□□ -0.03
ERGIC3-220ENST00000640748 DDX58O95786 925 aaKnown RBP14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 USP17L8P0C7I0 530 aa14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 ATP2B4P23634 1241 aa14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 CSRNP1Q96S65 589 aa14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 GREM2Q9H772 168 aa14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 MYOZ2Q9NPC6 264 aa14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 SCAF8Q9UPN6 1271 aaKnown RBP14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 PCDHB15Q9Y5E8 787 aa14.85□□□□□ -0.03
ERGIC3-220ENST00000640748 USP17L3A6NCW0 530 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 USP17L4A6NCW7 530 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 G3V3G9 751 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 IGHDP01880 384 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 CWF19L2Q2TBE0 894 aaKnown RBP14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 DCAF8Q5TAQ9 597 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 G2E3Q7L622 706 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 USP17L1Q7RTZ2 530 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 PODNQ7Z5L7 613 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 RASAL3Q86YV0 1011 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 MXD3Q9BW11 206 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 BSDC1Q9NW68 430 aaPredicted RBP14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 ZNF646O15015 1829 aaPredicted RBP14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 MED23Q9ULK4 1368 aa14.84□□□□□ -0.03
ERGIC3-220ENST00000640748 NEURL1BA8MQ27 555 aa14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 TRPA1O75762 1119 aa14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 DACT2Q5SW24 774 aa14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 INTS3Q68E01 1043 aaKnown RBP14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 MOB2Q70IA6 237 aa14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 TXNRD3Q86VQ6 643 aa14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 CDC5LQ99459 802 aaKnown RBP14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 PITPNM2Q9BZ72 1349 aa14.83□□□□□ -0.04
ERGIC3-220ENST00000640748 H7C1W4 665 aa14.82□□□□□ -0.04
ERGIC3-220ENST00000640748 ZBTB7BO15156 539 aaPredicted RBP14.82□□□□□ -0.04
ERGIC3-220ENST00000640748 NBPF9Q3BBW0 867 aa14.82□□□□□ -0.04
ERGIC3-220ENST00000640748 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
ERGIC3-220ENST00000640748 TNRC18O15417 2968 aaPredicted RBP14.82□□□□□ -0.04
ERGIC3-220ENST00000640748 SLC34A2O95436 690 aa14.81□□□□□ -0.04
ERGIC3-220ENST00000640748 KLRK1P26718 216 aa14.81□□□□□ -0.04
ERGIC3-220ENST00000640748 CCT4P50991 539 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms