RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 NEURL1BA8MQ27 555 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 STARD3NLO95772 234 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 FILIP1LQ4L180 1135 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 UNC5CLQ8IV45 518 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 MTMR6Q9Y217 621 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 NFAT5O94916 1531 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 TNNI3KQ59H18 835 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 NOM1Q5C9Z4 860 aaKnown RBP6.44□□□□□ -1.38
SCN3A-210ENST00000640652 KANK3Q6NY19 840 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 SPTLC3Q9NUV7 552 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 FPGT-TNNI3KV9GXZ4 949 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 ERLIN1O75477 346 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 KCNA6P17658 529 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 DDX46Q7L014 1031 aaKnown RBP6.44□□□□□ -1.38
SCN3A-210ENST00000640652 LUZP1Q86V48 1076 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 ZNF830Q96NB3 372 aaPredicted RBP6.44□□□□□ -1.38
SCN3A-210ENST00000640652 SLC52A2Q9HAB3 445 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 PA2G4Q9UQ80 394 aaKnown RBP6.44□□□□□ -1.38
SCN3A-210ENST00000640652 MAP4K1Q92918 833 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 TTC14Q96N46 770 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 CEMIPQ8WUJ3 1361 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 PTGS1P23219 599 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 GCKRQ14397 625 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 PDILTQ8N807 584 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 UBXN4Q92575 508 aa6.44□□□□□ -1.38
SCN3A-210ENST00000640652 TEX13AQ9BXU3 409 aaPredicted RBP6.44□□□□□ -1.38
SCN3A-210ENST00000640652 PPFIBP1Q86W92 1011 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 ERCC4Q92889 916 aaPredicted RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 FAM227BQ96M60 508 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 PLEKHG2Q9H7P9 1386 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 PYM1Q9BRP8 204 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 DSCC1Q9BVC3 393 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 DNAJC25Q9H1X3 360 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 LAMB1P07942 1786 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 ZNF213O14771 459 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 EIF3JO75822 258 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 CEBPAP49715 358 aaPredicted RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 DDX54Q8TDD1 881 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 MRFAP1L1Q96HT8 127 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 ALDH8A1Q9H2A2 487 aaPredicted RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 PRDM11Q9NQV5 511 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 KIF20AO95235 890 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 GCP02774 474 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 ANXA1P04083 346 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 TOP1P11387 765 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 KBTBD3Q8NAB2 608 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 A0A0U1RQG5 324 aaPredicted RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 CCT2P78371 535 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 STIM1Q13586 685 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 TXLNBQ8N3L3 684 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 RNF41Q9H4P4 317 aaPredicted RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 CNNM2Q9H8M5 875 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 TFIP11Q9UBB9 837 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 SLC12A7Q9Y666 1083 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 PTPDC1A2A3K4 754 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 SYKP43405 635 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 METAP2P50579 478 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 TOM1L2Q6ZVM7 507 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 KIF13BQ9NQT8 1826 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 CARMIL3Q8ND23 1372 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 A0A0D9SFI3 127 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 POTEB2H3BUK9 544 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 SPTLC2O15270 562 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 RNF113AO15541 343 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 TFCP2Q12800 502 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 SYCP1Q15431 976 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 COPS6Q7L5N1 327 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 CCDC47Q96A33 483 aaKnown RBP6.43□□□□□ -1.38
SCN3A-210ENST00000640652 HAUS7Q99871 368 aa6.43□□□□□ -1.38
SCN3A-210ENST00000640652 CCDC186Q7Z3E2 898 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 DOCK2Q92608 1830 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 UBAC1Q9BSL1 405 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 NAPBQ9H115 298 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 TPCN1Q9ULQ1 816 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 METTL24Q5JXM2 366 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 TMCO3Q6UWJ1 677 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 TMC6Q7Z403 805 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 NFATC2IPQ8NCF5 419 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 PLBD2Q8NHP8 589 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCN3A-210ENST00000640652 OGFRQ9NZT2 677 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.42□□□□□ -1.38
SCN3A-210ENST00000640652 NR1I2O75469 434 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 MCM3P25205 808 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 RASEFQ8IZ41 740 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 ZNF397Q8NF99 534 aaPredicted RBP6.42□□□□□ -1.38
SCN3A-210ENST00000640652 IL17RAQ96F46 866 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 MPHOSPH8Q99549 860 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 CAMTA1Q9Y6Y1 1673 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 PES1O00541 588 aaKnown RBP6.42□□□□□ -1.38
SCN3A-210ENST00000640652 BMP15O95972 392 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 COPRSQ9NQ92 184 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 MED1Q15648 1581 aaPredicted RBP6.42□□□□□ -1.38
SCN3A-210ENST00000640652 ARHGAP23Q9P227 1491 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 CPA1P15085 419 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 PTH1RQ03431 593 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 TSPYL1Q9H0U9 437 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 CBX8Q9HC52 389 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 TMOD3Q9NYL9 352 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 TNNT3P45378 269 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms