RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, human

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ3-208	ENST00000639496	ARHGEF10	O15013	1369 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	ZNF165	P49910	485 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	TMOD4	Q9NZQ9	345 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	BACH1	O14867	736 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	URI1	O94763	535 aa	Predicted RBP	11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	DNA2	P51530	1060 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	MAGEB6	Q8N7X4	407 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	TNPO1	Q92973	898 aa	Known RBP	11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	CCDC87	Q9NVE4	849 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	SLAIN2	Q9P270	581 aa		11.72	□□□□□ -0.53
KCNQ3-208	ENST00000639496	TNNT1	P13805	278 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	SDS	P20132	328 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	ZRANB1	Q9UGI0	708 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	HIBADH	P31937	336 aa	Known RBP	11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	MRPL50	Q8N5N7	158 aa	Known RBP	11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	NOD1	Q9Y239	953 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	HOXB7	P09629	217 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	UBE2H	P62256	183 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	PRPF4B	Q13523	1007 aa	Known RBP	11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	TAF12	Q16514	161 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	ZNF790	Q6PG37	636 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	TMCO3	Q6UWJ1	677 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	EHBP1	Q8NDI1	1231 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	FLAD1	Q8NFF5	587 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	PLBD2	Q8NHP8	589 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	DDX12P	Q92771	950 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	USP21	Q9UK80	565 aa		11.71	□□□□□ -0.53
KCNQ3-208	ENST00000639496	TRAPPC8	Q9Y2L5	1435 aa		11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ASIC1	P78348	528 aa		11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	NUCB1	Q02818	461 aa		11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	CWF19L2	Q2TBE0	894 aa	Known RBP	11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	GRIPAP1	Q4V328	841 aa		11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PDCL2	Q8N4E4	241 aa		11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	MIGA1	Q8NAN2	632 aa		11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	POLR3A	O14802	1390 aa	Predicted RBP	11.71	□□□□□ -0.54
KCNQ3-208	ENST00000639496	THOC2	Q8NI27	1593 aa	Known RBP	11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	FSD2	A1L4K1	749 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	CASQ1	P31415	396 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	WDR66	Q8TBY9	1149 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	CTAGE1	Q96RT6	745 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ARHGEF10L	Q9HCE6	1279 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ZFYVE9	O95405	1425 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	RRAGB	Q5VZM2	374 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	DPP8	Q6V1X1	898 aa	Predicted RBP	11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PA2G4	Q9UQ80	394 aa	Known RBP	11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	MAP2K1	Q02750	393 aa	Predicted RBP	11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	SMC1A	Q14683	1233 aa	Known RBP	11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	FAM98C	Q17RN3	349 aa	Known RBP	11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	TSNARE1	Q96NA8	513 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ESPN	B1AK53	854 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ESYT1	Q9BSJ8	1104 aa		11.7	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ASXL1	Q8IXJ9	1541 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	GOLGA6L10	A0A0M3HER8	536 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PDE8A	O60658	829 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	FAM13A	O94988	1023 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	MSANTD4	Q8NCY6	345 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	LRRC2	Q9BYS8	371 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	GLT8D2	Q9H1C3	349 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	GPHN	Q9NQX3	736 aa	Predicted RBP	11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	EYA2	O00167	538 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PPFIA3	O75145	1194 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	SSFA2	P28290	1259 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	GOPC	Q9HD26	462 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	HOMER2	Q9NSB8	354 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	APBA3	O96018	575 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PRPH	P41219	470 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	FAM89A	Q96GI7	184 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ORAI2	Q96SN7	254 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	MMRN2	Q9H8L6	949 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	LMAN1	P49257	510 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PRIM1	P49642	420 aa	Known RBP	11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496		Q6ZUG5	572 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ZSCAN30	Q86W11	494 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ZNF408	Q9H9D4	720 aa		11.69	□□□□□ -0.54
KCNQ3-208	ENST00000639496	SYCP2	Q9BX26	1530 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	RAD50	Q92878	1312 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	MRPS27	Q92552	414 aa	Known RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	TTC12	Q9H892	705 aa	Predicted RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	RAPGEF6	Q8TEU7	1601 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PARP1	P09874	1014 aa	Known RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ALDH1B1	P30837	517 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	PUM3	Q15397	648 aa	Known RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	KIAA0753	Q2KHM9	967 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ZNF354C	Q86Y25	554 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	TBC1D2	Q9BYX2	928 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	CYLC1	P35663	651 aa	Predicted RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	AFM	P43652	599 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	TMC6	Q7Z403	805 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	RBM28	Q9NW13	759 aa	Known RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	CEP83	Q9Y592	693 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	IKBKG	Q9Y6K9	419 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	DKC1	O60832	514 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	VAMP4	O75379	141 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	ZSCAN22	P10073	491 aa	Predicted RBP	11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	TFCP2	Q12800	502 aa		11.68	□□□□□ -0.54
KCNQ3-208	ENST00000639496	RAB3GAP1	Q15042	981 aa		11.68	□□□□□ -0.54

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