RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 CTNNA3Q9UI47 895 aa10.99□□□□□ -0.65
NECAP1-215ENST00000639071 RCOR1Q9UKL0 485 aa10.99□□□□□ -0.65
NECAP1-215ENST00000639071 PAXBP1Q9Y5B6 917 aa10.99□□□□□ -0.65
NECAP1-215ENST00000639071 E7EWF7 191 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 KBTBD3Q8NAB2 608 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 PAG1Q9NWQ8 432 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 C5P01031 1676 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 NCAPD2Q15021 1401 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 CCZ1BP86790 482 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 CCZ1P86791 482 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-215ENST00000639071 FAM160A1Q05DH4 1040 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 TTC5Q8N0Z6 440 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 MRFAP1L1Q96HT8 127 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 PCDHA7Q9UN72 937 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
NECAP1-215ENST00000639071 SMC2O95347 1197 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 PDIA3P30101 505 aaKnown RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 NDUFA8P51970 172 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 DPCR1Q3MIW9 517 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 NAA16Q6N069 864 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 CLIC4Q9Y696 253 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 HSPD1P10809 573 aaKnown RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 CDC25BP30305 580 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 SF3A1Q15459 793 aaKnown RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 ELF2Q15723 593 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 PTPN21Q16825 1174 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 SARM1Q6SZW1 724 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 ZNF771Q7L3S4 317 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 CEP57L1Q8IYX8 460 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 ENGASEQ8NFI3 743 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 ZNF396Q96N95 335 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 CCDC85AQ96PX6 553 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 GTPBP4Q9BZE4 634 aaKnown RBP10.97□□□□□ -0.65
NECAP1-215ENST00000639071 ANO10Q9NW15 660 aa10.97□□□□□ -0.65
NECAP1-215ENST00000639071 M0R2C6 588 aa10.96□□□□□ -0.65
NECAP1-215ENST00000639071 CSB-PGBD3P0DP91 1061 aa10.96□□□□□ -0.65
NECAP1-215ENST00000639071 FKBP4Q02790 459 aaKnown RBP eCLIP10.96□□□□□ -0.65
NECAP1-215ENST00000639071 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
NECAP1-215ENST00000639071 DDX17Q92841 729 aaKnown RBP10.96□□□□□ -0.65
NECAP1-215ENST00000639071 LLPHQ9BRT6 129 aaKnown RBP10.96□□□□□ -0.65
NECAP1-215ENST00000639071 LAMA4Q16363 1823 aa10.96□□□□□ -0.65
NECAP1-215ENST00000639071 KDM6AO15550 1401 aaPredicted RBP10.96□□□□□ -0.65
NECAP1-215ENST00000639071 CARMIL3Q8ND23 1372 aa10.96□□□□□ -0.65
NECAP1-215ENST00000639071 MAST3O60307 1309 aa10.96□□□□□ -0.66
NECAP1-215ENST00000639071 CTAGE5O15320 804 aa10.96□□□□□ -0.66
NECAP1-215ENST00000639071 FDPSP14324 419 aaKnown RBP10.96□□□□□ -0.66
NECAP1-215ENST00000639071 EXOSC10Q01780 885 aaKnown RBP10.96□□□□□ -0.66
NECAP1-215ENST00000639071 ZRSR1Q15695 479 aaKnown RBP10.96□□□□□ -0.66
NECAP1-215ENST00000639071 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.66
NECAP1-215ENST00000639071 CCAR2Q8N163 923 aaKnown RBP10.96□□□□□ -0.66
NECAP1-215ENST00000639071 MRPS27Q92552 414 aaKnown RBP10.96□□□□□ -0.66
NECAP1-215ENST00000639071 OGFRQ9NZT2 677 aa10.96□□□□□ -0.66
NECAP1-215ENST00000639071 CGNQ9P2M7 1197 aaKnown RBP10.96□□□□□ -0.66
NECAP1-215ENST00000639071 MRC1P22897 1456 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 CAVIN2O95810 425 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 SNRPA1P09661 255 aaKnown RBP10.95□□□□□ -0.66
NECAP1-215ENST00000639071 PHKG2P15735 406 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 STK38Q15208 465 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 NYAP1Q6ZVC0 841 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 TMC6Q7Z403 805 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 LRP10Q7Z4F1 713 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 NBPF11Q86T75 865 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 IFNKQ9P0W0 207 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 RGPD5Q99666 1765 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 ERBB3P21860 1342 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 SH3TC1Q8TE82 1336 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 HMGB1P09429 215 aaKnown RBP10.95□□□□□ -0.66
NECAP1-215ENST00000639071 IFIT1P09914 478 aaKnown RBP10.95□□□□□ -0.66
NECAP1-215ENST00000639071 RBM6P78332 1123 aaKnown RBP10.95□□□□□ -0.66
NECAP1-215ENST00000639071 RABL6Q3YEC7 729 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-215ENST00000639071 ATG9AQ7Z3C6 839 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 FMR1NBQ8N0W7 255 aaPredicted RBP10.95□□□□□ -0.66
NECAP1-215ENST00000639071 LRRN4CLQ8ND94 238 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 FEZ1Q99689 392 aa10.95□□□□□ -0.66
NECAP1-215ENST00000639071 XPO4Q9C0E2 1151 aaKnown RBP10.95□□□□□ -0.66
NECAP1-215ENST00000639071 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 GORABQ5T7V8 394 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 KIF18AQ8NI77 898 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 CABLES1Q8TDN4 633 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 PUS3Q9BZE2 481 aaKnown RBP10.94□□□□□ -0.66
NECAP1-215ENST00000639071 AFDNP55196 1824 aaKnown RBP10.94□□□□□ -0.66
NECAP1-215ENST00000639071 TATP17735 454 aaPredicted RBP10.94□□□□□ -0.66
NECAP1-215ENST00000639071 FBXO38Q6PIJ6 1188 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 TTLL7Q6ZT98 887 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
NECAP1-215ENST00000639071 ZBTB3Q9H5J0 574 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 ST7Q9NRC1 585 aa10.94□□□□□ -0.66
NECAP1-215ENST00000639071 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
NECAP1-215ENST00000639071 ZNF330Q9Y3S2 320 aaPredicted RBP10.94□□□□□ -0.66
NECAP1-215ENST00000639071 SIPA1L3O60292 1781 aaPredicted RBP10.94□□□□□ -0.66
NECAP1-215ENST00000639071 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
NECAP1-215ENST00000639071 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
NECAP1-215ENST00000639071 MARCKSP29966 332 aaPredicted RBP10.93□□□□□ -0.66
NECAP1-215ENST00000639071 FOXO4P98177 505 aa10.93□□□□□ -0.66
NECAP1-215ENST00000639071 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
NECAP1-215ENST00000639071 OSBP2Q969R2 916 aa10.93□□□□□ -0.66
NECAP1-215ENST00000639071 C8orf76Q96K31 380 aa10.93□□□□□ -0.66
NECAP1-215ENST00000639071 HELLSQ9NRZ9 838 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms