RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 TAF5LO75529 589 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 KLRK1P26718 216 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 GMPSP49915 693 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-214ENST00000638843 TNIP1Q15025 636 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 EAPPQ56P03 285 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-214ENST00000638843 LDHAL6AQ6ZMR3 332 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 TXNRD3Q86VQ6 643 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 CCDC88AQ3V6T2 1871 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 ZNF804BA4D1E1 1349 aa11.97□□□□□ -0.49
SCARB2-214ENST00000638843 TAF7LQ5H9L4 462 aa11.97□□□□□ -0.49
SCARB2-214ENST00000638843 INTS3Q68E01 1043 aaKnown RBP11.97□□□□□ -0.49
SCARB2-214ENST00000638843 ATF7IPQ6VMQ6 1270 aa11.97□□□□□ -0.49
SCARB2-214ENST00000638843 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
SCARB2-214ENST00000638843 GPRC5DQ9NZD1 345 aa11.97□□□□□ -0.49
SCARB2-214ENST00000638843 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
SCARB2-214ENST00000638843 SHTN1A0MZ66 631 aa11.96□□□□□ -0.49
SCARB2-214ENST00000638843 LMOD1P29536 600 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-214ENST00000638843 PNMA8AQ86V59 439 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-214ENST00000638843 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
SCARB2-214ENST00000638843 KLHDC4Q8TBB5 520 aa11.96□□□□□ -0.49
SCARB2-214ENST00000638843 CLUAP1Q96AJ1 413 aa11.96□□□□□ -0.49
SCARB2-214ENST00000638843 MEIS3Q99687 375 aa11.96□□□□□ -0.49
SCARB2-214ENST00000638843 CNNM1Q9NRU3 951 aa11.96□□□□□ -0.49
SCARB2-214ENST00000638843 LTBP1Q14766 1721 aa11.96□□□□□ -0.49
SCARB2-214ENST00000638843 MED23Q9ULK4 1368 aa11.96□□□□□ -0.5
SCARB2-214ENST00000638843 PCNTO95613 3336 aa11.96□□□□□ -0.5
SCARB2-214ENST00000638843 G3V3G9 751 aa11.96□□□□□ -0.5
SCARB2-214ENST00000638843 POTEB2H3BUK9 544 aa11.96□□□□□ -0.5
SCARB2-214ENST00000638843 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.5
SCARB2-214ENST00000638843 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.5
SCARB2-214ENST00000638843 PLIN1O60240 522 aa11.95□□□□□ -0.5
SCARB2-214ENST00000638843 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
SCARB2-214ENST00000638843 KCNJ4P48050 445 aa11.95□□□□□ -0.5
SCARB2-214ENST00000638843 HTRA3P83110 453 aa11.95□□□□□ -0.5
SCARB2-214ENST00000638843 LRRC24Q50LG9 513 aa11.95□□□□□ -0.5
SCARB2-214ENST00000638843 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
SCARB2-214ENST00000638843 PODNQ7Z5L7 613 aa11.95□□□□□ -0.5
SCARB2-214ENST00000638843 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
SCARB2-214ENST00000638843 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
SCARB2-214ENST00000638843 LRRFIP2Q9Y608 721 aaKnown RBP11.95□□□□□ -0.5
SCARB2-214ENST00000638843 IRS2Q9Y4H2 1338 aa11.94□□□□□ -0.5
SCARB2-214ENST00000638843 RFX5P48382 616 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-214ENST00000638843 APLP1P51693 650 aa11.94□□□□□ -0.5
SCARB2-214ENST00000638843 MAP1SQ66K74 1059 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-214ENST00000638843 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
SCARB2-214ENST00000638843 DPF2Q92785 391 aa11.94□□□□□ -0.5
SCARB2-214ENST00000638843 ADARB2Q9NS39 739 aaKnown RBP11.94□□□□□ -0.5
SCARB2-214ENST00000638843 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-214ENST00000638843 HIRAP54198 1017 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-214ENST00000638843 USP50Q70EL3 339 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-214ENST00000638843 TMEM57Q8N5G2 664 aa11.93□□□□□ -0.5
SCARB2-214ENST00000638843 TRPM4Q8TD43 1214 aa11.93□□□□□ -0.5
SCARB2-214ENST00000638843 COA1Q9GZY4 146 aa11.93□□□□□ -0.5
SCARB2-214ENST00000638843 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 EGFRP00533 1210 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 RLBP1P12271 317 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
SCARB2-214ENST00000638843 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
SCARB2-214ENST00000638843 C15orf52Q6ZUT6 534 aaKnown RBP11.92□□□□□ -0.5
SCARB2-214ENST00000638843 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 SAMD7Q7Z3H4 446 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 H7C1D1 291 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 GNAI3P08754 354 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 RSBN1LQ6PCB5 846 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-214ENST00000638843 GMLQ99445 158 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
SCARB2-214ENST00000638843 MROH5Q6ZUA9 1318 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 PASKQ96RG2 1323 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 UBE4AQ14139 1066 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 TBC1D10BQ4KMP7 808 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-214ENST00000638843 METTL24Q5JXM2 366 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 DACT2Q5SW24 774 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 VGLL2Q8N8G2 317 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 HDAC5Q9UQL6 1122 aa11.91□□□□□ -0.5
SCARB2-214ENST00000638843 EYA2O00167 538 aa11.9□□□□□ -0.5
SCARB2-214ENST00000638843 PDE8BO95263 885 aa11.9□□□□□ -0.5
SCARB2-214ENST00000638843 STRIP1Q5VSL9 837 aa11.9□□□□□ -0.5
SCARB2-214ENST00000638843 TTLL5Q6EMB2 1281 aa11.9□□□□□ -0.5
SCARB2-214ENST00000638843 ATG9AQ7Z3C6 839 aa11.9□□□□□ -0.5
SCARB2-214ENST00000638843 FTSJ3Q8IY81 847 aaKnown RBP11.9□□□□□ -0.5
SCARB2-214ENST00000638843 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
SCARB2-214ENST00000638843 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
SCARB2-214ENST00000638843 PA2G4Q9UQ80 394 aaKnown RBP11.9□□□□□ -0.5
SCARB2-214ENST00000638843 MYH3P11055 1940 aa11.9□□□□□ -0.5
SCARB2-214ENST00000638843 IL1R1P14778 569 aa11.89□□□□□ -0.51
SCARB2-214ENST00000638843 GYG1P46976 350 aa11.89□□□□□ -0.51
SCARB2-214ENST00000638843 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-214ENST00000638843 GTF2IP78347 998 aa11.89□□□□□ -0.51
SCARB2-214ENST00000638843 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCARB2-214ENST00000638843 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
SCARB2-214ENST00000638843 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms