RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CAMK4Q16566 473 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 BRINP3Q76B58 766 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 RIC3Q7Z5B4 369 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 TTC6Q86TZ1 520 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 CEP120Q8N960 986 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
GFAP-228ENST00000638488 EFCAB8A8MWE9 144 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 ARID5BQ14865 1188 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 CKAP2LQ8IYA6 745 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 MNS1Q8NEH6 495 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 ZNF496Q96IT1 587 aaPredicted RBP14.11□□□□□ -0.15
GFAP-228ENST00000638488 HYPKQ9NX55 129 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 DACT1Q9NYF0 836 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 PA2G4Q9UQ80 394 aaKnown RBP14.11□□□□□ -0.15
GFAP-228ENST00000638488 CYP27B1O15528 508 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 TADA3O75528 432 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 POLA2Q14181 598 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 CARD10Q9BWT7 1032 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 ADAM21Q9UKJ8 722 aa14.11□□□□□ -0.15
GFAP-228ENST00000638488 LMAN1P49257 510 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 IQCB1Q15051 598 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 CC2D1AQ6P1N0 951 aaPredicted RBP14.1□□□□□ -0.15
GFAP-228ENST00000638488 PPP1R13BQ96KQ4 1090 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 CEP89Q96ST8 783 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 OSBPL5Q9H0X9 879 aaPredicted RBP14.1□□□□□ -0.15
GFAP-228ENST00000638488 DNAJC25Q9H1X3 360 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 PRDM11Q9NQV5 511 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 IMPACTQ9P2X3 320 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 DCCP43146 1447 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 SASH3O75995 380 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 DDX58O95786 925 aaKnown RBP14.1□□□□□ -0.15
GFAP-228ENST00000638488 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 AK2P54819 239 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 DHX37Q8IY37 1157 aaKnown RBP14.1□□□□□ -0.15
GFAP-228ENST00000638488 GPATCH11Q8N954 259 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 CXorf56Q9H5V9 222 aa14.1□□□□□ -0.15
GFAP-228ENST00000638488 DDX21Q9NR30 783 aaKnown RBP eCLIP14.1□□□□□ -0.15
GFAP-228ENST00000638488 CAMTA1Q9Y6Y1 1673 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 CCP110O43303 1012 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 RAB11FIP3O75154 756 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 GJB2P29033 226 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 TOM1L2Q6ZVM7 507 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 RUFY3Q7L099 469 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 SCAND2PQ9GZW5 306 aaPredicted RBP14.09□□□□□ -0.15
GFAP-228ENST00000638488 MKRN1Q9UHC7 482 aaKnown RBP14.09□□□□□ -0.15
GFAP-228ENST00000638488 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
GFAP-228ENST00000638488 EIF3CLB5ME19 914 aaKnown RBP14.09□□□□□ -0.15
GFAP-228ENST00000638488 CORO7P57737 925 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 PDIA6Q15084 440 aa14.09□□□□□ -0.15
GFAP-228ENST00000638488 E4F1Q66K89 784 aaPredicted RBP14.09□□□□□ -0.15
GFAP-228ENST00000638488 EIF3CQ99613 913 aaKnown RBP14.09□□□□□ -0.15
GFAP-228ENST00000638488 ZCCHC17Q9NP64 241 aaKnown RBP14.09□□□□□ -0.15
GFAP-228ENST00000638488 OVOS2A0A0G2JMS6 1433 aa14.08□□□□□ -0.15
GFAP-228ENST00000638488 HEG1Q9ULI3 1381 aa14.08□□□□□ -0.15
GFAP-228ENST00000638488 TTC41PQ6P2S7 1318 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 CABP4P57796 275 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 MMS22LQ6ZRQ5 1243 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 COPS6Q7L5N1 327 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 CCDC150Q8NCX0 1101 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 ZSCAN31Q96LW9 406 aaPredicted RBP14.08□□□□□ -0.16
GFAP-228ENST00000638488 MED4Q9NPJ6 270 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 SH2B1Q9NRF2 756 aaPredicted RBP14.08□□□□□ -0.16
GFAP-228ENST00000638488 KCNG1Q9UIX4 513 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 N4BP2Q86UW6 1770 aaPredicted RBP14.08□□□□□ -0.16
GFAP-228ENST00000638488 SEC31AO94979 1220 aaKnown RBP14.08□□□□□ -0.16
GFAP-228ENST00000638488 RPAINQ86UA6 219 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 SUCLG2Q96I99 432 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 STRN4Q9NRL3 753 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 DNAI1Q9UI46 699 aa14.08□□□□□ -0.16
GFAP-228ENST00000638488 AOX1Q06278 1338 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 GOLGA6L4A6NEF3 574 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 ETF1P62495 437 aaKnown RBP14.07□□□□□ -0.16
GFAP-228ENST00000638488 LRRFIP1Q32MZ4 808 aaKnown RBP14.07□□□□□ -0.16
GFAP-228ENST00000638488 GPR161Q8N6U8 529 aaKnown RBP14.07□□□□□ -0.16
GFAP-228ENST00000638488 DCAF5Q96JK2 942 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 MYD88Q99836 296 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 STAP2Q9UGK3 403 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 GRM8O00222 908 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 ALDH1L1O75891 902 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 SATB1Q01826 763 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 SIL1Q9H173 461 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 ZSCAN16Q9H4T2 348 aaPredicted RBP14.07□□□□□ -0.16
GFAP-228ENST00000638488 BICC1Q9H694 974 aaKnown RBP14.07□□□□□ -0.16
GFAP-228ENST00000638488 ARFGAP3Q9NP61 516 aa14.07□□□□□ -0.16
GFAP-228ENST00000638488 NRDCO43847 1150 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 MSL3Q8N5Y2 521 aaKnown RBP14.06□□□□□ -0.16
GFAP-228ENST00000638488 LINS1Q8NG48 757 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 SNX14Q9Y5W7 946 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 NEXNQ0ZGT2 675 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 JAKMIP3Q5VZ66 844 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 EFCAB13Q8IY85 973 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 IL25Q9H293 177 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 SLAIN2Q9P270 581 aa14.06□□□□□ -0.16
GFAP-228ENST00000638488 SIPA1L3O60292 1781 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms