RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 BEND6Q5SZJ8 279 aaPredicted RBP13.89□□□□□ -0.19
CAPN3-221ENST00000638141 UNC5CLQ8IV45 518 aa13.89□□□□□ -0.19
CAPN3-221ENST00000638141 AKAP2Q9Y2D5 859 aa13.89□□□□□ -0.19
CAPN3-221ENST00000638141 TUBBP07437 444 aa13.89□□□□□ -0.19
CAPN3-221ENST00000638141 ME3Q16798 604 aa13.89□□□□□ -0.19
CAPN3-221ENST00000638141 TBC1D22AQ8WUA7 517 aa13.89□□□□□ -0.19
CAPN3-221ENST00000638141 PDE11AQ9HCR9 933 aa13.89□□□□□ -0.19
CAPN3-221ENST00000638141 MAP3K5Q99683 1374 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 PLEKHG1Q9ULL1 1385 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 ERLIN1O75477 346 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 HSP90B1P14625 803 aaKnown RBP13.88□□□□□ -0.19
CAPN3-221ENST00000638141 MSANTD4Q8NCY6 345 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 EDC4Q6P2E9 1401 aaKnown RBP13.88□□□□□ -0.19
CAPN3-221ENST00000638141 PSMA5P28066 241 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 CFAP45Q9UL16 551 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 CACNA1FO60840 1977 aa13.88□□□□□ -0.19
CAPN3-221ENST00000638141 ERLIN2O94905 339 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 C11orf91Q3C1V1 193 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 ATL3Q6DD88 541 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 ACBD3Q9H3P7 528 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 L1RE1Q9UN81 338 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 ILDR1Q86SU0 546 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-221ENST00000638141 AOPEPQ8N6M6 819 aa13.87□□□□□ -0.19
CAPN3-221ENST00000638141 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
CAPN3-221ENST00000638141 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
CAPN3-221ENST00000638141 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 HNRNPH1P31943 449 aaKnown RBP13.86□□□□□ -0.19
CAPN3-221ENST00000638141 DDR1Q08345 913 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 TUBB2AQ13885 445 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 JAKMIP1Q96N16 626 aaKnown RBP13.86□□□□□ -0.19
CAPN3-221ENST00000638141 TUBB2BQ9BVA1 445 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 XPO4Q9C0E2 1151 aaKnown RBP13.86□□□□□ -0.19
CAPN3-221ENST00000638141 GBP3Q9H0R5 595 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 FAN1Q9Y2M0 1017 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 VWA3AA6NCI4 1184 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 PATL2C9JE40 543 aaKnown RBP13.86□□□□□ -0.19
CAPN3-221ENST00000638141 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-221ENST00000638141 LRCH2Q5VUJ6 765 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 FERMT3Q86UX7 667 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 CNNM3Q8NE01 707 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 SSH3Q8TE77 659 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 DDX11Q96FC9 970 aa13.86□□□□□ -0.19
CAPN3-221ENST00000638141 CRB1P82279 1406 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 MNAT1P51948 309 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 MAP2K1Q02750 393 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-221ENST00000638141 RESTQ13127 1097 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 NBPF6Q5VWK0 638 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 FAM173BQ6P4H8 233 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 NBPF4Q96M43 638 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 ARHGAP6O43182 974 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 GNL2Q13823 731 aaKnown RBP13.85□□□□□ -0.19
CAPN3-221ENST00000638141 HSP90B2PQ58FF3 399 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 JMYQ8N9B5 988 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 ENGASEQ8NFI3 743 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 KAT2BQ92831 832 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 EPC1Q9H2F5 836 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 VIPAS39Q9H9C1 493 aa13.85□□□□□ -0.19
CAPN3-221ENST00000638141 TFIP11Q9UBB9 837 aaKnown RBP13.85□□□□□ -0.19
CAPN3-221ENST00000638141 ERCC3P19447 782 aa13.84□□□□□ -0.19
CAPN3-221ENST00000638141 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
CAPN3-221ENST00000638141 KIFC2Q96AC6 838 aa13.84□□□□□ -0.19
CAPN3-221ENST00000638141 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
CAPN3-221ENST00000638141 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
CAPN3-221ENST00000638141 RCOR1Q9UKL0 485 aa13.84□□□□□ -0.19
CAPN3-221ENST00000638141 KINO60870 393 aaKnown RBP13.83□□□□□ -0.19
CAPN3-221ENST00000638141 SHOX2O60902 331 aaPredicted RBP13.83□□□□□ -0.19
CAPN3-221ENST00000638141 AARSP49588 968 aaKnown RBP eCLIP13.83□□□□□ -0.19
CAPN3-221ENST00000638141 FAM160A1Q05DH4 1040 aa13.83□□□□□ -0.19
CAPN3-221ENST00000638141 HSP90AB4PQ58FF6 505 aa13.83□□□□□ -0.19
CAPN3-221ENST00000638141 CCDC73Q6ZRK6 1079 aa13.83□□□□□ -0.19
CAPN3-221ENST00000638141 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.19
CAPN3-221ENST00000638141 SYTL4Q96C24 671 aaPredicted RBP13.83□□□□□ -0.19
CAPN3-221ENST00000638141 IFNKQ9P0W0 207 aa13.83□□□□□ -0.19
CAPN3-221ENST00000638141 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.19
CAPN3-221ENST00000638141 ABCC6O95255 1503 aa13.83□□□□□ -0.19
CAPN3-221ENST00000638141 PNMA6EA0A0J9YXQ4 647 aa13.83□□□□□ -0.2
CAPN3-221ENST00000638141 TMCO5BA8MYB1 307 aa13.83□□□□□ -0.2
CAPN3-221ENST00000638141 MYO1BO43795 1136 aa13.83□□□□□ -0.2
CAPN3-221ENST00000638141 SNRKQ9NRH2 765 aa13.83□□□□□ -0.2
CAPN3-221ENST00000638141 ALKQ9UM73 1620 aa13.83□□□□□ -0.2
CAPN3-221ENST00000638141 FAM83GA6ND36 823 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 HIP1O00291 1037 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 GLRX3O76003 335 aaKnown RBP13.82□□□□□ -0.2
CAPN3-221ENST00000638141 SETQ01105 290 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-221ENST00000638141 POLA2Q14181 598 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 NECTIN1Q15223 517 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 CEP112Q8N8E3 955 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 PRPF38AQ8NAV1 312 aaKnown RBP13.82□□□□□ -0.2
CAPN3-221ENST00000638141 ANKZF1Q9H8Y5 726 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 PPP2R2CQ9Y2T4 447 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 METP08581 1390 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 GOLIM4O00461 696 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms