RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 ZNF804AQ7Z570 1209 aa11.38□□□□□ -0.59
CACNA1A-239ENST00000637297 VPS37DQ86XT2 251 aa11.38□□□□□ -0.59
CACNA1A-239ENST00000637297 ZNF784Q8NCA9 323 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-239ENST00000637297 SSH3Q8TE77 659 aa11.38□□□□□ -0.59
CACNA1A-239ENST00000637297 FBXW7Q969H0 707 aa11.38□□□□□ -0.59
CACNA1A-239ENST00000637297 MED23Q9ULK4 1368 aa11.38□□□□□ -0.59
CACNA1A-239ENST00000637297 WTIPA6NIX2 430 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 SNAP23O00161 211 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 RAD17O75943 681 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 SLC5A1P13866 664 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 PUM3Q15397 648 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 CAVIN4Q5BKX8 364 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 ATG9AQ7Z3C6 839 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 GPC2Q8N158 579 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 COA1Q9GZY4 146 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 AKAP2Q9Y2D5 859 aa11.37□□□□□ -0.59
CACNA1A-239ENST00000637297 ZNF541Q9H0D2 1346 aa11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 FRAT2O75474 233 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 CXCL9Q07325 125 aa11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 POLA2Q14181 598 aa11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 TXNRD3Q86VQ6 643 aa11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 RRAGCQ9HB90 399 aa11.36□□□□□ -0.59
CACNA1A-239ENST00000637297 YDJCA8MPS7 323 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 VEGFAP15692 232 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 KLRK1P26718 216 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 HIBADHP31937 336 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 TFCP2Q12800 502 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 AAMPQ13685 434 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 ATP2B3Q16720 1220 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 C15orf52Q6ZUT6 534 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 LPIN2Q92539 896 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 NEUROD6Q96NK8 337 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 COL4A5P29400 1685 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 UTRNP46939 3433 aa11.35□□□□□ -0.59
CACNA1A-239ENST00000637297 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 USP17L3A6NCW0 530 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 USP17L4A6NCW7 530 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 PSMD14O00487 310 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 GYG1P46976 350 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 GORABQ5T7V8 394 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 TTLL5Q6EMB2 1281 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 USP17L1Q7RTZ2 530 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 VGLL2Q8N8G2 317 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 NMRK2Q9NPI5 230 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 EXOC6BQ9Y2D4 811 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 NOP58Q9Y2X3 529 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 MYH13Q9UKX3 1938 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 SCN4AP35499 1836 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 SCN9AQ15858 1988 aa11.34□□□□□ -0.59
CACNA1A-239ENST00000637297 APBB1O00213 710 aa11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 TIMM10P62072 90 aa11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 GTF2IP78347 998 aa11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 FAM84BQ96KN1 310 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 BCL11AQ9H165 835 aa11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 GNL3LQ9NVN8 582 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
CACNA1A-239ENST00000637297 PSME4Q14997 1843 aa11.32□□□□□ -0.6
CACNA1A-239ENST00000637297 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
CACNA1A-239ENST00000637297 A0A1B0GUL7 405 aa11.32□□□□□ -0.6
CACNA1A-239ENST00000637297 IL1R1P14778 569 aa11.32□□□□□ -0.6
CACNA1A-239ENST00000637297 FGFR2P21802 821 aa11.32□□□□□ -0.6
CACNA1A-239ENST00000637297 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-239ENST00000637297 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-239ENST00000637297 H7C1D1 291 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 RAB11FIP3O75154 756 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 SASH1O94885 1247 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 VIL1P09327 827 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 BCAMP50895 628 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 STRIP1Q5VSL9 837 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 CENPQQ7L2Z9 268 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 SIRT2Q8IXJ6 389 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 IQSEC3Q9UPP2 1182 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
CACNA1A-239ENST00000637297 EPHX2P34913 555 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 PNMA8AQ86V59 439 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 CLASRPQ8N2M8 674 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 RHPN1Q8TCX5 695 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 DPF2Q92785 391 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
CACNA1A-239ENST00000637297 GPR108Q9NPR9 543 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms