RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	ATCAY	Q86WG3	371 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	SPICE1	Q8N0Z3	855 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	ANKRD42	Q8N9B4	389 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	PPHLN1	Q8NEY8	458 aa	Known RBP	3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	ZNF296	Q8WUU4	475 aa	Predicted RBP	3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	CHMP4C	Q96CF2	233 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	SLC10A4	Q96EP9	437 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	EAF1	Q96JC9	268 aa	Predicted RBP	3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	TTC14	Q96N46	770 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	TMEM74	Q96NL1	305 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	SLC26A8	Q96RN1	970 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	HERPUD2	Q9BSE4	406 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	OSBPL7	Q9BZF2	842 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	CDH19	Q9H159	772 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	CSRNP2	Q9H175	543 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	PRDM11	Q9NQV5	511 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	AASDHPPT	Q9NRN7	309 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	EVA1B	Q9NVM1	165 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	PCDH10	Q9P2E7	1040 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	USP25	Q9UHP3	1055 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	TAGLN3	Q9UI15	199 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	KLF15	Q9UIH9	416 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	SLC27A5	Q9Y2P5	690 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	SPEF1	Q9Y4P9	236 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	CD2AP	Q9Y5K6	639 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	PTCH2	Q9Y6C5	1203 aa		3.22	□□□□□ -1.89
GABRB3-223	ENST00000637293	RPGRIP1L	Q68CZ1	1315 aa		3.21	□□□□□ -1.89
GABRB3-223	ENST00000637293	POTEF	A5A3E0	1075 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	RASSF10	A6NK89	507 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	POTEC	B2RU33	542 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	PRRT4	C9JH25	899 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ZBTB39	O15060	712 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	PDE8A	O60658	829 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	RFPL3	O75679	317 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	RNASEH2A	O75792	299 aa	Known RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	SEC24B	O95487	1268 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	F2	P00734	622 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	CT47B1	P0C2W7	299 aa	Predicted RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	TRIM27	P14373	513 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	POU3F3	P20264	500 aa	Predicted RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ZAP70	P43403	619 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	HTR3A	P46098	478 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	PSMA6	P60900	246 aa	Known RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	SSRP1	Q08945	709 aa	Known RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	APOBR	Q0VD83	1088 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	PDE1C	Q14123	709 aa	Predicted RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	SLC9A5	Q14940	896 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	LONRF2	Q1L5Z9	754 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	C11orf91	Q3C1V1	193 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	AKAP4	Q5JQC9	854 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	FAM83B	Q5T0W9	1011 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	USPL1	Q5W0Q7	1092 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	CXorf57	Q6NSI4	855 aa	Known RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	CASC1	Q6TDU7	716 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	CHRDL2	Q6WN34	429 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ZBTB46	Q86UZ6	589 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	TNS4	Q8IZW8	715 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	MAGEB6	Q8N7X4	407 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ST13P5	Q8NFI4	369 aa	Predicted RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	RIN3	Q8TB24	985 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ENOX1	Q8TC92	643 aa	Known RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	PI4K2B	Q8TCG2	481 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	NKD1	Q969G9	470 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	CCDC74A	Q96AQ1	378 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	SHD	Q96IW2	340 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	C2orf49	Q9BVC5	232 aa	Predicted RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ASPSCR1	Q9BZE9	553 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ST7	Q9NRC1	585 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	POLG2	Q9UHN1	485 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	PUF60	Q9UHX1	559 aa	Known RBP	3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ASAP1	Q9ULH1	1129 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	ROBO2	Q9HCK4	1378 aa		3.21	□□□□□ -1.9
GABRB3-223	ENST00000637293	MAGEB6P1	A0A0J9YX57	407 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	TMEM238L	A0A1B0GVL6	79 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293		A0A1W2PRU2	124 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	ANO9	A1A5B4	782 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	MINDY4B	A8MYZ0	360 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	TMEM229A	B2RXF0	380 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	CBFA2T2	O43439	604 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	RFPL1	O75677	317 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	PHKG2	P15735	406 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	PDE6B	P35913	854 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	ATN1	P54259	1190 aa	Predicted RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	GDF10	P55107	478 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	GEMIN4	P57678	1058 aa	Known RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	BIRC3	Q13489	604 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	PUM3	Q15397	648 aa	Known RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	CCDC85B	Q15834	202 aa	Predicted RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	CCDC96	Q2M329	555 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	GLIPR1L2	Q4G1C9	344 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	FAM133B	Q5BKY9	247 aa	Known RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	HYI	Q5T013	277 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	RNF219	Q5W0B1	726 aa	Predicted RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	ERAP2	Q6P179	960 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	CC2D1A	Q6P1N0	951 aa	Predicted RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	MMS22L	Q6ZRQ5	1243 aa		3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	DDX46	Q7L014	1031 aa	Known RBP	3.2	□□□□□ -1.9
GABRB3-223	ENST00000637293	SH3BP5L	Q7L8J4	393 aa		3.2	□□□□□ -1.9

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