RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	AMPD3	Q01432	767 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	FAM47C	Q5HY64	1035 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	STXBP4	Q6ZWJ1	553 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SEPT10	Q9P0V9	454 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MYCL	P12524	364 aa	Predicted RBP	18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	LDHAL6A	Q6ZMR3	332 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	OGFOD1	Q8N543	542 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	AKR1B10	O60218	316 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	RAPGEF3	O95398	923 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	NAPA	P54920	295 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	GSDMB	Q8TAX9	411 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	DDX27	Q96GQ7	796 aa	Known RBP	18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SAT1	P21673	171 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CYP7A1	P22680	504 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TMPO	P42166	694 aa	Known RBP	18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	PPP2R5A	Q15172	486 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SH2D4B	Q5SQS7	431 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SLC4A4	Q9Y6R1	1079 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SYNDIG1L	A6NDD5	238 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CCDC169	A6NNP5	214 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	HSPA4	P34932	840 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	PARD3B	Q8TEW8	1205 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	FOXO3	O43524	673 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	PDE4B	Q07343	736 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SLF2	Q8IX21	1173 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	THEMIS	Q8N1K5	641 aa	Predicted RBP	18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	PDCD7	Q8N8D1	485 aa	Known RBP	18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	DNAAF4	Q8WXU2	420 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TNPO1	Q92973	898 aa	Known RBP	18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	FYCO1	Q9BQS8	1478 aa		18.53	■□□□□ 0.56
CACNA1A-238	ENST00000637276	ATP6V1A	P38606	617 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SPDYE2B	A6NHP3	402 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	RHOXF2B	P0C7M4	288 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SPDYE6	P0CI01	402 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	LMOD1	P29536	600 aa	Predicted RBP	18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	ITK	Q08881	620 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	DHX58	Q96C10	678 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	RHOXF2	Q9BQY4	288 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	KRT19	P08727	400 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CASP2	P42575	452 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	ANKRD50	Q9ULJ7	1429 aa		18.52	■□□□□ 0.56
CACNA1A-238	ENST00000637276	ASIC1	P78348	528 aa		18.52	■□□□□ 0.55
CACNA1A-238	ENST00000637276	RRP9	O43818	475 aa	Known RBP	18.52	■□□□□ 0.55
CACNA1A-238	ENST00000637276	HELB	Q8NG08	1087 aa	Predicted RBP	18.52	■□□□□ 0.55
CACNA1A-238	ENST00000637276	RBM28	Q9NW13	759 aa	Known RBP	18.52	■□□□□ 0.55
CACNA1A-238	ENST00000637276	EXOC5	O00471	708 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	TFCP2L1	Q9NZI6	479 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ITM2B	Q9Y287	266 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	BIRC3	Q13489	604 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	GPHN	Q9NQX3	736 aa	Predicted RBP	18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	CCDC122	Q5T0U0	273 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	PAGR1	Q9BTK6	254 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	TNNI2	P48788	182 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	GTF2A1	P52655	376 aa	Predicted RBP	18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	PRPF38A	Q8NAV1	312 aa	Known RBP	18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MYOM3	Q5VTT5	1437 aa		18.51	■□□□□ 0.55
CACNA1A-238	ENST00000637276	GPCPD1	Q9NPB8	672 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ZNF692	Q9BU19	519 aa	Predicted RBP	18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	HDAC9	Q9UKV0	1011 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	DTNB	O60941	627 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	BAG3	O95817	575 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	KIF9	Q9HAQ2	790 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	NSD3	Q9BZ95	1437 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	PTPRO	Q16827	1216 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	CACYBP	Q9HB71	228 aa	Known RBP	18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	COX16	Q9P0S2	106 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	IARS	P41252	1262 aa	Known RBP	18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	RAD51AP2	Q09MP3	1159 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ANKLE2	Q86XL3	938 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	WDR63	Q8IWG1	891 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	TBC1D7	Q9P0N9	293 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	LPXN	O60711	386 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	HPD	P32754	393 aa	Predicted RBP	18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ATP6V0A2	Q9Y487	856 aa		18.5	■□□□□ 0.55
CACNA1A-238	ENST00000637276	GLRX3	O76003	335 aa	Known RBP	18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ZNF513	Q8N8E2	541 aa	Predicted RBP	18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	OLA1	Q9NTK5	396 aa	Known RBP	18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	SESTD1	Q86VW0	696 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	CCDC196	A0A1B0GTZ2	297 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	WDR46	O15213	610 aa	Known RBP	18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MIPOL1	Q8TD10	442 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	PPP1R12C	Q9BZL4	782 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	TRIM31	Q9BZY9	425 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	CCDC110	Q8TBZ0	833 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MCM3	P25205	808 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ZNF710	Q8N1W2	664 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	DDX17	Q92841	729 aa	Known RBP	18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	NFE2L2	Q16236	605 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	FCHSD1	Q86WN1	690 aa		18.49	■□□□□ 0.55
CACNA1A-238	ENST00000637276	STX1A	Q16623	288 aa		18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	TBC1D31	Q96DN5	1066 aa		18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	GKAP1	Q5VSY0	366 aa	Predicted RBP	18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ZNF131	P52739	623 aa		18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	BRD3	Q15059	726 aa		18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	LONRF3	Q496Y0	759 aa		18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	NUDT16	Q96DE0	195 aa	Known RBP	18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	RASAL2	Q9UJF2	1139 aa		18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ERBIN	Q96RT1	1412 aa		18.48	■□□□□ 0.55
CACNA1A-238	ENST00000637276	PTPDC1	A2A3K4	754 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms