RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 SCRN1Q12765 414 aa17.77■□□□□ 0.44
CLN5-209ENST00000636405 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
CLN5-209ENST00000636405 CDHR2Q9BYE9 1310 aa17.77■□□□□ 0.44
CLN5-209ENST00000636405 ALDH8A1Q9H2A2 487 aaPredicted RBP17.77■□□□□ 0.44
CLN5-209ENST00000636405 GTF3C6Q969F1 213 aa17.76■□□□□ 0.43
CLN5-209ENST00000636405 NCOA5Q9HCD5 579 aaKnown RBP17.76■□□□□ 0.43
CLN5-209ENST00000636405 SEC31BQ9NQW1 1179 aa17.76■□□□□ 0.43
CLN5-209ENST00000636405 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
CLN5-209ENST00000636405 TMEM87AQ8NBN3 555 aa17.76■□□□□ 0.43
CLN5-209ENST00000636405 ATP6V1DQ9Y5K8 247 aa17.76■□□□□ 0.43
CLN5-209ENST00000636405 PDE8AO60658 829 aa17.75■□□□□ 0.43
CLN5-209ENST00000636405 PHKA1P46020 1223 aa17.75■□□□□ 0.43
CLN5-209ENST00000636405 EIF5P55010 431 aaKnown RBP17.75■□□□□ 0.43
CLN5-209ENST00000636405 DHX32Q7L7V1 743 aaKnown RBP17.75■□□□□ 0.43
CLN5-209ENST00000636405 LOC102724428A0A0B4J2F2 783 aa17.75■□□□□ 0.43
CLN5-209ENST00000636405 SIK1P57059 783 aa17.75■□□□□ 0.43
CLN5-209ENST00000636405 ANP32BQ92688 251 aaKnown RBP17.75■□□□□ 0.43
CLN5-209ENST00000636405 LRP6O75581 1613 aa17.75■□□□□ 0.43
CLN5-209ENST00000636405 UBE2HP62256 183 aa17.74■□□□□ 0.43
CLN5-209ENST00000636405 VGLL2Q8N8G2 317 aa17.74■□□□□ 0.43
CLN5-209ENST00000636405 CCDC87Q9NVE4 849 aa17.74■□□□□ 0.43
CLN5-209ENST00000636405 SLIT2O94813 1529 aa17.74■□□□□ 0.43
CLN5-209ENST00000636405 CCDC173Q0VFZ6 552 aa17.74■□□□□ 0.43
CLN5-209ENST00000636405 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
CLN5-209ENST00000636405 RAB11FIP4Q86YS3 637 aa17.74■□□□□ 0.43
CLN5-209ENST00000636405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.74■□□□□ 0.43
CLN5-209ENST00000636405 ERVV-1B6SEH8 477 aa17.73■□□□□ 0.43
CLN5-209ENST00000636405 PDE8BO95263 885 aa17.73■□□□□ 0.43
CLN5-209ENST00000636405 FGAP02671 866 aa17.73■□□□□ 0.43
CLN5-209ENST00000636405 EXOSC10Q01780 885 aaKnown RBP17.73■□□□□ 0.43
CLN5-209ENST00000636405 TSPY26PQ9H489 355 aa17.73■□□□□ 0.43
CLN5-209ENST00000636405 PIH1D3Q9NQM4 214 aaKnown RBP17.73■□□□□ 0.43
CLN5-209ENST00000636405 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
CLN5-209ENST00000636405 DENND2AQ9ULE3 1009 aa17.73■□□□□ 0.43
CLN5-209ENST00000636405 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
CLN5-209ENST00000636405 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
CLN5-209ENST00000636405 PPP1R9BQ96SB3 815 aa17.73■□□□□ 0.43
CLN5-209ENST00000636405 ESPNB1AK53 854 aa17.72■□□□□ 0.43
CLN5-209ENST00000636405 GIMAP6Q6P9H5 292 aa17.72■□□□□ 0.43
CLN5-209ENST00000636405 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
CLN5-209ENST00000636405 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
CLN5-209ENST00000636405 SLC9C2Q5TAH2 1124 aa17.72■□□□□ 0.43
CLN5-209ENST00000636405 CCDC102BQ68D86 513 aa17.72■□□□□ 0.43
CLN5-209ENST00000636405 DOT1LQ8TEK3 1739 aa17.72■□□□□ 0.43
CLN5-209ENST00000636405 GPAA1O43292 621 aa17.71■□□□□ 0.43
CLN5-209ENST00000636405 FAM98CQ17RN3 349 aaKnown RBP17.71■□□□□ 0.43
CLN5-209ENST00000636405 NKX2-3Q8TAU0 364 aa17.71■□□□□ 0.43
CLN5-209ENST00000636405 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
CLN5-209ENST00000636405 PDCP20941 246 aa17.71■□□□□ 0.43
CLN5-209ENST00000636405 APPBP2Q92624 585 aa17.71■□□□□ 0.43
CLN5-209ENST00000636405 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLN5-209ENST00000636405 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 GUCY1B3Q02153 619 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 CEBPZQ03701 1054 aaKnown RBP17.7■□□□□ 0.42
CLN5-209ENST00000636405 CCDC183Q5T5S1 534 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 SPATA31A5Q5VU36 1347 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 SPATA31A7Q8IWB4 1347 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 FAM184AQ8NB25 1140 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 WWC3Q9ULE0 1092 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 AHDC1Q5TGY3 1603 aaPredicted RBP17.7■□□□□ 0.42
CLN5-209ENST00000636405 NUP98P52948 1817 aa17.7■□□□□ 0.42
CLN5-209ENST00000636405 WTIPA6NIX2 430 aaPredicted RBP17.69■□□□□ 0.42
CLN5-209ENST00000636405 H3BQV1 296 aa17.69■□□□□ 0.42
CLN5-209ENST00000636405 PFKFB2O60825 505 aa17.69■□□□□ 0.42
CLN5-209ENST00000636405 HMGB1P09429 215 aaKnown RBP17.69■□□□□ 0.42
CLN5-209ENST00000636405 KRT85P78386 507 aa17.69■□□□□ 0.42
CLN5-209ENST00000636405 IFFO2Q5TF58 517 aa17.69■□□□□ 0.42
CLN5-209ENST00000636405 NSUN7Q8NE18 718 aaKnown RBP17.69■□□□□ 0.42
CLN5-209ENST00000636405 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
CLN5-209ENST00000636405 MPNDQ8N594 471 aa17.69■□□□□ 0.42
CLN5-209ENST00000636405 TAOK2Q9UL54 1235 aa17.69■□□□□ 0.42
CLN5-209ENST00000636405 PTPDC1A2A3K4 754 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 APPP05067 770 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 LIG1P18858 919 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 PDIA3P30101 505 aaKnown RBP17.68■□□□□ 0.42
CLN5-209ENST00000636405 CAMK4Q16566 473 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 FAM182BQ5T319 152 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
CLN5-209ENST00000636405 IMMTQ16891 758 aaKnown RBP17.68■□□□□ 0.42
CLN5-209ENST00000636405 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
CLN5-209ENST00000636405 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLN5-209ENST00000636405 INCENPQ9NQS7 918 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 ZNF532Q9HCE3 1301 aa17.68■□□□□ 0.42
CLN5-209ENST00000636405 ADD2P35612 726 aa17.67■□□□□ 0.42
CLN5-209ENST00000636405 IQSEC3Q9UPP2 1182 aaPredicted RBP17.67■□□□□ 0.42
CLN5-209ENST00000636405 THRAP3Q9Y2W1 955 aaKnown RBP17.67■□□□□ 0.42
CLN5-209ENST00000636405 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
CLN5-209ENST00000636405 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
CLN5-209ENST00000636405 C8orf37Q96NL8 207 aa17.67■□□□□ 0.42
CLN5-209ENST00000636405 PUM3Q15397 648 aaKnown RBP17.66■□□□□ 0.42
CLN5-209ENST00000636405 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
CLN5-209ENST00000636405 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
CLN5-209ENST00000636405 COL22A1Q8NFW1 1626 aaPredicted RBP17.66■□□□□ 0.42
CLN5-209ENST00000636405 LAMA4Q16363 1823 aa17.66■□□□□ 0.42
CLN5-209ENST00000636405 PRC1O43663 620 aa17.66■□□□□ 0.42
CLN5-209ENST00000636405 PHF14O94880 888 aa17.66■□□□□ 0.42
CLN5-209ENST00000636405 FGFR2P21802 821 aa17.66■□□□□ 0.42
CLN5-209ENST00000636405 BCAMP50895 628 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms