RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 ARMC5Q96C12 935 aa9.5□□□□□ -0.89
CIITA-214ENST00000636238 ERO1AQ96HE7 468 aa9.5□□□□□ -0.89
CIITA-214ENST00000636238 CHPF2Q9P2E5 772 aa9.5□□□□□ -0.89
CIITA-214ENST00000636238 PPP2R3BQ9Y5P8 575 aa9.5□□□□□ -0.89
CIITA-214ENST00000636238 ASTN2O75129 1339 aaPredicted RBP9.5□□□□□ -0.89
CIITA-214ENST00000636238 PDE8AO60658 829 aa9.49□□□□□ -0.89
CIITA-214ENST00000636238 TMPOP42166 694 aaKnown RBP9.49□□□□□ -0.89
CIITA-214ENST00000636238 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
CIITA-214ENST00000636238 TTLL12Q14166 644 aaPredicted RBP9.49□□□□□ -0.89
CIITA-214ENST00000636238 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
CIITA-214ENST00000636238 OTUD7BQ6GQQ9 843 aa9.49□□□□□ -0.89
CIITA-214ENST00000636238 ANKRD18AQ8IVF6 992 aa9.49□□□□□ -0.89
CIITA-214ENST00000636238 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
CIITA-214ENST00000636238 CDC5LQ99459 802 aaKnown RBP9.49□□□□□ -0.89
CIITA-214ENST00000636238 COA1Q9GZY4 146 aa9.49□□□□□ -0.89
CIITA-214ENST00000636238 WNT10BO00744 389 aa9.48□□□□□ -0.89
CIITA-214ENST00000636238 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
CIITA-214ENST00000636238 DACT2Q5SW24 774 aa9.48□□□□□ -0.89
CIITA-214ENST00000636238 BSDC1Q9NW68 430 aaPredicted RBP9.48□□□□□ -0.89
CIITA-214ENST00000636238 AKAP11Q9UKA4 1901 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 PPP1R12BO60237 982 aaPredicted RBP9.47□□□□□ -0.89
CIITA-214ENST00000636238 PTPN12Q05209 780 aaKnown RBP9.47□□□□□ -0.89
CIITA-214ENST00000636238 NBPF9Q3BBW0 867 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 OTOP1Q7RTM1 612 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 IFNL1Q8IU54 200 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 MTMR14Q8NCE2 650 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 ZBED3Q96IU2 234 aaPredicted RBP9.47□□□□□ -0.89
CIITA-214ENST00000636238 PTPN22Q9Y2R2 807 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 LEMD3Q9Y2U8 911 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 TRIM17Q9Y577 477 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 LAMB2P55268 1798 aa9.47□□□□□ -0.89
CIITA-214ENST00000636238 DDX58O95786 925 aaKnown RBP9.46□□□□□ -0.9
CIITA-214ENST00000636238 FXR1P51114 621 aaKnown RBP eCLIP9.46□□□□□ -0.9
CIITA-214ENST00000636238 SUPT20HL1Q3ZLR7 823 aa9.46□□□□□ -0.9
CIITA-214ENST00000636238 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
CIITA-214ENST00000636238 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
CIITA-214ENST00000636238 TMEM106CQ9BVX2 250 aa9.46□□□□□ -0.9
CIITA-214ENST00000636238 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
CIITA-214ENST00000636238 CWC25Q9NXE8 425 aaPredicted RBP9.46□□□□□ -0.9
CIITA-214ENST00000636238 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.9
CIITA-214ENST00000636238 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
CIITA-214ENST00000636238 CALD1Q05682 793 aaKnown RBP9.45□□□□□ -0.9
CIITA-214ENST00000636238 MOB2Q70IA6 237 aa9.45□□□□□ -0.9
CIITA-214ENST00000636238 NBPF11Q86T75 865 aa9.45□□□□□ -0.9
CIITA-214ENST00000636238 ANKRD2Q9GZV1 360 aa9.45□□□□□ -0.9
CIITA-214ENST00000636238 CAPN2P17655 700 aa9.44□□□□□ -0.9
CIITA-214ENST00000636238 CCT4P50991 539 aaKnown RBP9.44□□□□□ -0.9
CIITA-214ENST00000636238 CTSWP56202 376 aa9.44□□□□□ -0.9
CIITA-214ENST00000636238 FKBP1AP62942 108 aaKnown RBP9.44□□□□□ -0.9
CIITA-214ENST00000636238 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
CIITA-214ENST00000636238 WNK4Q96J92 1243 aa9.44□□□□□ -0.9
CIITA-214ENST00000636238 METTL22Q9BUU2 404 aaPredicted RBP9.44□□□□□ -0.9
CIITA-214ENST00000636238 EFCC1Q9HA90 598 aa9.44□□□□□ -0.9
CIITA-214ENST00000636238 ANGEL1Q9UNK9 670 aaKnown RBP9.44□□□□□ -0.9
CIITA-214ENST00000636238 MINPP1Q9UNW1 487 aa9.44□□□□□ -0.9
CIITA-214ENST00000636238 ZNF804BA4D1E1 1349 aa9.44□□□□□ -0.9
CIITA-214ENST00000636238 ZNF521Q96K83 1311 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 POTEFA5A3E0 1075 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 MYO1BO43795 1136 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 WDHD1O75717 1129 aaPredicted RBP9.43□□□□□ -0.9
CIITA-214ENST00000636238 GNRH1P01148 92 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 IREB2P48200 963 aaKnown RBP9.43□□□□□ -0.9
CIITA-214ENST00000636238 SP3Q02447 781 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
CIITA-214ENST00000636238 ZNF333Q96JL9 665 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 DEFB129Q9H1M3 183 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 R3HDMLQ9H3Y0 253 aa9.43□□□□□ -0.9
CIITA-214ENST00000636238 ZCCHC17Q9NP64 241 aaKnown RBP9.43□□□□□ -0.9
CIITA-214ENST00000636238 SUPT16HQ9Y5B9 1047 aaKnown RBP9.43□□□□□ -0.9
CIITA-214ENST00000636238 HTTP42858 3142 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 IGF2BP3O00425 579 aaKnown RBP eCLIP9.42□□□□□ -0.9
CIITA-214ENST00000636238 IGHMBP2P38935 993 aaKnown RBP9.42□□□□□ -0.9
CIITA-214ENST00000636238 PRMT2P55345 433 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 DLGAP5Q15398 846 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 KRT24Q2M2I5 525 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 RTL5Q5HYW3 569 aaPredicted RBP9.42□□□□□ -0.9
CIITA-214ENST00000636238 PRAMEF18Q5VWM3 479 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 ANKRD13AQ8IZ07 590 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 TTLL11Q8NHH1 800 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 MYD88Q99836 296 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
CIITA-214ENST00000636238 TRIM35Q9UPQ4 493 aa9.42□□□□□ -0.9
CIITA-214ENST00000636238 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 SASH1O94885 1247 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 ZNF853P0CG23 659 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 GNAI1P63096 354 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 SLFN5Q08AF3 891 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 NEXNQ0ZGT2 675 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 MKRN3Q13064 507 aaKnown RBP9.41□□□□□ -0.9
CIITA-214ENST00000636238 CRHR2Q13324 411 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 PLA2G12BQ9BX93 195 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 IFT57Q9NWB7 429 aa9.41□□□□□ -0.9
CIITA-214ENST00000636238 PSME4Q14997 1843 aa9.4□□□□□ -0.9
CIITA-214ENST00000636238 COL4A1P02462 1669 aa9.4□□□□□ -0.9
CIITA-214ENST00000636238 SPDYE2BA6NHP3 402 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms