RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	DPEP1	P16444	411 aa		11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	ARID4A	P29374	1257 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	KCNJ4	P48050	445 aa		11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	TTC39A	Q5SRH9	613 aa		11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	HAUS7	Q99871	368 aa		11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	BOLA2	Q9H3K6	86 aa		11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	SPON1	Q9HCB6	807 aa		11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	SNED1	Q8TER0	1413 aa		11.69	□□□□□ -0.54
CACNA1A-223	ENST00000636058	AKAP11	Q9UKA4	1901 aa		11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058		A0A0G2JLW4	131 aa		11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058	TRIM6-TRIM34	B2RNG4	842 aa		11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058	ATP2B4	P23634	1241 aa		11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058	KLRK1	P26718	216 aa		11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058	PHKA1	P46020	1223 aa		11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058	C15orf52	Q6ZUT6	534 aa	Known RBP	11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058	C7orf43	Q8WVR3	580 aa		11.68	□□□□□ -0.54
CACNA1A-223	ENST00000636058	ZBTB22	O15209	634 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	CDC45	O75419	566 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	MAP4K4	O95819	1239 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	UQCRFS1P1	P0C7P4	283 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	BCAM	P50895	628 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	SCARF1	Q14162	830 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	CAVIN4	Q5BKX8	364 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	OLFM4	Q6UX06	510 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	CNTROB	Q8N137	903 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	TTLL6	Q8N841	843 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	TBC1D16	Q8TBP0	767 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	RILPL2	Q969X0	211 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	EVI5L	Q96CN4	794 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	FAM84B	Q96KN1	310 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	BACH2	Q9BYV9	841 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	TMX4	Q9H1E5	349 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	POLL	Q9UGP5	575 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	GGA1	Q9UJY5	639 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	MED23	Q9ULK4	1368 aa		11.67	□□□□□ -0.54
CACNA1A-223	ENST00000636058	UFL1	O94874	794 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	MCAM	P43121	646 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	GYG1	P46976	350 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	CC2D2B	Q6DHV5	1058 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	FBXO33	Q7Z6M2	555 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	TXNRD3	Q86VQ6	643 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	MPND	Q8N594	471 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	PIM2	Q9P1W9	311 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	NDUFB9	Q9Y6M9	179 aa		11.66	□□□□□ -0.54
CACNA1A-223	ENST00000636058	SEMA3E	O15041	775 aa		11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	RASGRF1	Q13972	1273 aa		11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	GRIPAP1	Q4V328	841 aa		11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	DPP8	Q6V1X1	898 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	TBC1D9	Q6ZT07	1266 aa		11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	EDC3	Q96F86	508 aa	Known RBP	11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	DNAJC2	Q99543	621 aa	Known RBP	11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	PAG1	Q9NWQ8	432 aa		11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	HMG20B	Q9P0W2	317 aa		11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA1A-223	ENST00000636058	RFX7	Q2KHR2	1363 aa		11.65	□□□□□ -0.55
CACNA1A-223	ENST00000636058	MYH13	Q9UKX3	1938 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	COL1A1	P02452	1464 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	GOLIM4	O00461	696 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	HIBADH	P31937	336 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	ZAP70	P43403	619 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	PI16	Q6UXB8	463 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	TICAM2	Q86XR7	235 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	VPS37D	Q86XT2	251 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	SPATA5	Q8NB90	893 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	GPR101	Q96P66	508 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	ANTXR1	Q9H6X2	564 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	SNRK	Q9NRH2	765 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	GNL3L	Q9NVN8	582 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	DOCK2	Q92608	1830 aa		11.64	□□□□□ -0.55
CACNA1A-223	ENST00000636058	PDS5A	Q29RF7	1337 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	C6orf229	H3BNL8	230 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	C21orf2	O43822	256 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	CYP2E1	P05181	493 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	CHML	P26374	656 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	CCDC93	Q567U6	631 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	DALRD3	Q5D0E6	543 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	CASC1	Q6TDU7	716 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	ZNF804A	Q7Z570	1209 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	KLHL34	Q8N239	644 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	KBTBD3	Q8NAB2	608 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	FSD1	Q9BTV5	496 aa		11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1A-223	ENST00000636058	SEC24B	O95487	1268 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	IL1R1	P14778	569 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	TTF1	Q15361	905 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	SOGA3	Q5TF21	947 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	RTKN2	Q8IZC4	609 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	NLGN2	Q8NFZ4	835 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	TDRD7	Q8NHU6	1098 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	EYA3	Q99504	573 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	DENND2A	Q9ULE3	1009 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	ARFGEF1	Q9Y6D6	1849 aa		11.62	□□□□□ -0.55
CACNA1A-223	ENST00000636058	MYH7	P12883	1935 aa		11.61	□□□□□ -0.55
CACNA1A-223	ENST00000636058	HIP1	O00291	1037 aa		11.61	□□□□□ -0.55
CACNA1A-223	ENST00000636058	WASHC4	Q2M389	1173 aa		11.61	□□□□□ -0.55
CACNA1A-223	ENST00000636058	SUPT20H	Q8NEM7	779 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms