RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 FPGT-TNNI3KV9GXZ4 949 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 SMC2O95347 1197 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 ERCC6LQ2NKX8 1250 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 ZNF274Q96GC6 653 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 SRRTQ9BXP5 876 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 PCDHA7Q9UN72 937 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 LTN1O94822 1766 aa17.23■□□□□ 0.35
CACNA1A-220ENST00000635988 IGKV5-2P06315 115 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 PDE4CQ08493 712 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 SYT10Q6XYQ8 523 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 TMC6Q7Z403 805 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 XPO4Q9C0E2 1151 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 PHLPP2Q6ZVD8 1323 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 EXOSC10Q01780 885 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 C14orf37Q86TY3 774 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 LRRC2Q9BYS8 371 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 IFNKQ9P0W0 207 aa17.22■□□□□ 0.35
CACNA1A-220ENST00000635988 NEURL1BA8MQ27 555 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 TPM1P09493 284 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 ARMCX5Q6P1M9 558 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 ETF1P62495 437 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 GCKRQ14397 625 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 SF3A1Q15459 793 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 CCDC129Q6ZRS4 1044 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 STOX1Q6ZVD7 989 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 KBTBD3Q8NAB2 608 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
CACNA1A-220ENST00000635988 YEATS4O95619 227 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 CLCN6P51797 869 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 NLRP12P59046 1061 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 FHOD1Q9Y613 1164 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 ABCC6O95255 1503 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 FOSBP53539 338 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 STK38Q15208 465 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 UBXN4Q92575 508 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 SEC62Q99442 399 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 NFAT5O94916 1531 aa17.2■□□□□ 0.34
CACNA1A-220ENST00000635988 A0A087WWV3 80 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 IKBKBO14920 756 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 ATP8B1O43520 1251 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 CYP2C19P33261 490 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 TFCP2Q12800 502 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 ARHGAP29Q52LW3 1261 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 ILDR1Q86SU0 546 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 LINC00301Q8NCQ3 95 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 NPHP1O15259 732 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 PDIA3P30101 505 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 NDUFA8P51970 172 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 CCT2P78371 535 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 TEX35Q5T0J7 233 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 TMCO3Q6UWJ1 677 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 POLR3EQ9NVU0 708 aa17.19■□□□□ 0.34
CACNA1A-220ENST00000635988 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 A0A1B0GVL5 298 aa17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 PNMA6AP0CW24 399 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 PDIA6Q15084 440 aa17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 FBXL16Q8N461 479 aa17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 METTL22Q9BUU2 404 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 RFX5P48382 616 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 PTPN12Q05209 780 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-220ENST00000635988 PRAMEF22A3QJZ6 481 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 CBFA2T2O43439 604 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 BRAPQ7Z569 592 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 MNS1Q8NEH6 495 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 FBXW7Q969H0 707 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 ERCC4Q92889 916 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 TMEM51Q9NW97 253 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 LMTK3Q96Q04 1460 aa17.17■□□□□ 0.34
CACNA1A-220ENST00000635988 E7EWF7 191 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 SPTLC2O15270 562 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 MYO1BO43795 1136 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 ZRANB2O95218 330 aaKnown RBP eCLIP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 EVCP57679 992 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 GUCY1B3Q02153 619 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 RABL6Q3YEC7 729 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 DBNDD2Q9BQY9 259 aa17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 ORC3Q9UBD5 711 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 NAP1L2Q9ULW6 460 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-220ENST00000635988 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms