RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
SMARCA2-245ENST00000635688 NGLY1Q96IV0 654 aa11.73□□□□□ -0.53
SMARCA2-245ENST00000635688 UCN2Q96RP3 112 aa11.73□□□□□ -0.53
SMARCA2-245ENST00000635688 PIK3R4Q99570 1358 aa11.73□□□□□ -0.53
SMARCA2-245ENST00000635688 ZNF232Q9UNY5 417 aa11.73□□□□□ -0.53
SMARCA2-245ENST00000635688 ASXL1Q8IXJ9 1541 aa11.72□□□□□ -0.53
SMARCA2-245ENST00000635688 DAPK1P53355 1430 aa11.72□□□□□ -0.53
SMARCA2-245ENST00000635688 TPCN2Q8NHX9 752 aa11.72□□□□□ -0.53
SMARCA2-245ENST00000635688 AMOTL2Q9Y2J4 779 aa11.72□□□□□ -0.53
SMARCA2-245ENST00000635688 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.53
SMARCA2-245ENST00000635688 TMEM131LA2VDJ0 1609 aa11.71□□□□□ -0.53
SMARCA2-245ENST00000635688 ANKRD30AQ9BXX3 1397 aa11.71□□□□□ -0.53
SMARCA2-245ENST00000635688 TSPAN10Q9H1Z9 355 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-245ENST00000635688 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.54
SMARCA2-245ENST00000635688 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-245ENST00000635688 DCCP43146 1447 aa11.7□□□□□ -0.54
SMARCA2-245ENST00000635688 PNPLA6Q8IY17 1366 aa11.7□□□□□ -0.54
SMARCA2-245ENST00000635688 SERTM1A2A2V5 107 aa11.7□□□□□ -0.54
SMARCA2-245ENST00000635688 DOC2BQ14184 412 aa11.7□□□□□ -0.54
SMARCA2-245ENST00000635688 DDX17Q92841 729 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-245ENST00000635688 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 NHSL1Q5SYE7 1610 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 STARD13Q9Y3M8 1113 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 MST1RQ04912 1400 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
SMARCA2-245ENST00000635688 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
SMARCA2-245ENST00000635688 RAB44Q7Z6P3 723 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-245ENST00000635688 PLEKHM2Q8IWE5 1019 aa11.68□□□□□ -0.54
SMARCA2-245ENST00000635688 Q8N3U1 123 aa11.68□□□□□ -0.54
SMARCA2-245ENST00000635688 RHPN1Q8TCX5 695 aa11.68□□□□□ -0.54
SMARCA2-245ENST00000635688 HSH2DQ96JZ2 352 aa11.68□□□□□ -0.54
SMARCA2-245ENST00000635688 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
SMARCA2-245ENST00000635688 TRPM2O94759 1503 aa11.67□□□□□ -0.54
SMARCA2-245ENST00000635688 SIN3BO75182 1162 aa11.67□□□□□ -0.54
SMARCA2-245ENST00000635688 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
SMARCA2-245ENST00000635688 USP21Q9UK80 565 aa11.67□□□□□ -0.54
SMARCA2-245ENST00000635688 TRPC5Q9UL62 973 aaPredicted RBP11.67□□□□□ -0.54
SMARCA2-245ENST00000635688 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
SMARCA2-245ENST00000635688 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
SMARCA2-245ENST00000635688 TRIM50Q86XT4 487 aa11.66□□□□□ -0.54
SMARCA2-245ENST00000635688 ZNF280CQ8ND82 737 aa11.66□□□□□ -0.54
SMARCA2-245ENST00000635688 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
SMARCA2-245ENST00000635688 ALAS2P22557 587 aa11.65□□□□□ -0.54
SMARCA2-245ENST00000635688 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
SMARCA2-245ENST00000635688 NEUROD4Q9HD90 331 aa11.65□□□□□ -0.54
SMARCA2-245ENST00000635688 GPC6Q9Y625 555 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-245ENST00000635688 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 M0R082 166 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 DKK1O94907 266 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 PSMA6P60900 246 aaKnown RBP11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 SPEM2Q0P670 501 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 FNBP4Q8N3X1 1017 aaPredicted RBP11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 OGFOD1Q8N543 542 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 TSEN2Q8NCE0 465 aaKnown RBP11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 ZNF417Q8TAU3 575 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 TNFRSF25Q93038 417 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 ZNF587Q96SQ5 575 aaPredicted RBP11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 PHACTR1Q9C0D0 580 aa11.64□□□□□ -0.55
SMARCA2-245ENST00000635688 ATRNO75882 1429 aa11.63□□□□□ -0.55
SMARCA2-245ENST00000635688 C21orf2O43822 256 aa11.63□□□□□ -0.55
SMARCA2-245ENST00000635688 RAD21O60216 631 aa11.63□□□□□ -0.55
SMARCA2-245ENST00000635688 ALBP02768 609 aa11.63□□□□□ -0.55
SMARCA2-245ENST00000635688 SEMA6BQ9H3T3 888 aa11.63□□□□□ -0.55
SMARCA2-245ENST00000635688 EP400Q96L91 3159 aa11.63□□□□□ -0.55
SMARCA2-245ENST00000635688 ANKRD50Q9ULJ7 1429 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 ATP9BO43861 1147 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 GATA4P43694 442 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 ATP1A2P50993 1020 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 HIRAP54198 1017 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 BRD7Q9NPI1 651 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 MKRN1Q9UHC7 482 aaKnown RBP11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 XRN1Q8IZH2 1706 aaKnown RBP11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 UNC13BO14795 1591 aa11.62□□□□□ -0.55
SMARCA2-245ENST00000635688 MICALL1Q8N3F8 863 aa11.61□□□□□ -0.55
SMARCA2-245ENST00000635688 SUSD3Q96L08 255 aa11.61□□□□□ -0.55
SMARCA2-245ENST00000635688 CEP63Q96MT8 703 aa11.61□□□□□ -0.55
SMARCA2-245ENST00000635688 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
SMARCA2-245ENST00000635688 PTCH1Q13635 1447 aa11.6□□□□□ -0.55
SMARCA2-245ENST00000635688 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
SMARCA2-245ENST00000635688 METP08581 1390 aa11.6□□□□□ -0.55
SMARCA2-245ENST00000635688 ADH7P40394 386 aa11.6□□□□□ -0.55
SMARCA2-245ENST00000635688 TYRO3Q06418 890 aa11.6□□□□□ -0.55
SMARCA2-245ENST00000635688 LARGE2Q8N3Y3 721 aa11.6□□□□□ -0.55
SMARCA2-245ENST00000635688 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
SMARCA2-245ENST00000635688 C1orf167Q5SNV9 1468 aa11.59□□□□□ -0.55
SMARCA2-245ENST00000635688 KCNQ4P56696 695 aa11.59□□□□□ -0.55
SMARCA2-245ENST00000635688 SIX5Q8N196 739 aa11.59□□□□□ -0.55
SMARCA2-245ENST00000635688 NRXN3Q9Y4C0 1643 aa11.59□□□□□ -0.55
SMARCA2-245ENST00000635688 PALM3A6NDB9 673 aaPredicted RBP11.58□□□□□ -0.56
SMARCA2-245ENST00000635688 M0R2N6 131 aa11.58□□□□□ -0.56
SMARCA2-245ENST00000635688 NID1P14543 1247 aa11.58□□□□□ -0.56
SMARCA2-245ENST00000635688 C20orf204Q6ZNR8 217 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms