RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 THEMISQ8N1K5 641 aaPredicted RBP6.55□□□□□ -1.36
CDRT1-208ENST00000630868 ANKLE1Q8NAG6 615 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 NPHS2Q9NP85 383 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 KBTBD4Q9NVX7 518 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 USP20Q9Y2K6 914 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 SYNMO15061 1565 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 TIAM1Q13009 1591 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 UGGT1Q9NYU2 1555 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 CEP162Q5TB80 1403 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 K7ELQ4 463 aaPredicted RBP6.54□□□□□ -1.36
CDRT1-208ENST00000630868 GIPC1O14908 333 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 MICAL2O94851 1124 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 C1orf53Q5VUE5 145 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 NXPE4Q6UWF7 544 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 RASGRP4Q8TDF6 673 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 MICAL1Q8TDZ2 1067 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 SNX29Q8TEQ0 813 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 STRCP1A6NGW2 1772 aa6.54□□□□□ -1.36
CDRT1-208ENST00000630868 RNF17Q9BXT8 1623 aaKnown RBP6.54□□□□□ -1.36
CDRT1-208ENST00000630868 IQGAP1P46940 1657 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 TGFBR3LH3BV60 316 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 MEN1O00255 615 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 KIF3BO15066 747 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 RPIAP49247 311 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 PTPROQ16827 1216 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 CKAP2LQ8IYA6 745 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 FAM163AQ96GL9 167 aaPredicted RBP6.53□□□□□ -1.36
CDRT1-208ENST00000630868 HSH2DQ96JZ2 352 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 NIFKQ9BYG3 293 aaKnown RBP6.53□□□□□ -1.36
CDRT1-208ENST00000630868 ZNF408Q9H9D4 720 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 NEUROD4Q9HD90 331 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 FAM13BQ9NYF5 915 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 MTUS2Q5JR59 1369 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 CCDC141Q6ZP82 1450 aa6.53□□□□□ -1.36
CDRT1-208ENST00000630868 WASHC2CQ9Y4E1 1318 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 EHBP1L1Q8N3D4 1523 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 F6X3S4 739 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 MARCH6O60337 910 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 RPLP1P05386 114 aaKnown RBP6.52□□□□□ -1.37
CDRT1-208ENST00000630868 POLR3DP05423 398 aaPredicted RBP6.52□□□□□ -1.37
CDRT1-208ENST00000630868 XRCC5P13010 732 aaKnown RBP6.52□□□□□ -1.37
CDRT1-208ENST00000630868 PLA2G4AP47712 749 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 IDH3AP50213 366 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 NFE2L2Q16236 605 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 ZNF280CQ8ND82 737 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 RHPN1Q8TCX5 695 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 RHBDD1Q8TEB9 315 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 C7orf43Q8WVR3 580 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 KCNB2Q92953 911 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 MRFAP1L1Q96HT8 127 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 AGBL1Q96MI9 1066 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 ZSCAN10Q96SZ4 725 aaPredicted RBP6.52□□□□□ -1.37
CDRT1-208ENST00000630868 KRTAP3-3Q9BYR6 98 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 BCO2Q9BYV7 579 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 ZFYVE28Q9HCC9 887 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 ADAMTS1Q9UHI8 967 aa6.52□□□□□ -1.37
CDRT1-208ENST00000630868 ZC3H13Q5T200 1668 aaKnown RBP6.52□□□□□ -1.37
CDRT1-208ENST00000630868 HSD3B2P26439 372 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 PTGIRP43119 386 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 NBPF6Q5VWK0 638 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 ZNF438Q7Z4V0 828 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 NBPF4Q96M43 638 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 SPON2Q9BUD6 331 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 CHRDQ9H2X0 955 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 TMEM63CQ9P1W3 806 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 ARHGAP23Q9P227 1491 aa6.51□□□□□ -1.37
CDRT1-208ENST00000630868 FAM135BQ49AJ0 1406 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 ABCC3O15438 1527 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 ARHGEF5Q12774 1597 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 ERVK-7P63135 1459 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 NCOA2Q15596 1464 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 POTECB2RU33 542 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 PHACTR2O75167 634 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 NASPP49321 788 aaPredicted RBP6.5□□□□□ -1.37
CDRT1-208ENST00000630868 GRM2Q14416 872 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 TMEM214Q6NUQ4 689 aaKnown RBP6.5□□□□□ -1.37
CDRT1-208ENST00000630868 XKR5Q6UX68 686 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 KIAA0825Q8IV33 1275 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 EMID1Q96A84 441 aaPredicted RBP6.5□□□□□ -1.37
CDRT1-208ENST00000630868 SEC16BQ96JE7 1060 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 SUSD3Q96L08 255 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 TRIM56Q9BRZ2 755 aaKnown RBP6.5□□□□□ -1.37
CDRT1-208ENST00000630868 POLR3GLQ9BT43 218 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 SRCIN1Q9C0H9 1055 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 KCNMB2Q9Y691 235 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 SLIT1O75093 1534 aa6.5□□□□□ -1.37
CDRT1-208ENST00000630868 CAMSAP2Q08AD1 1489 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 SCAF11Q99590 1463 aaKnown RBP6.49□□□□□ -1.37
CDRT1-208ENST00000630868 ENPP3O14638 875 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 EIF5BO60841 1220 aaKnown RBP6.49□□□□□ -1.37
CDRT1-208ENST00000630868 SSBP05455 408 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDRT1-208ENST00000630868 GRNP28799 593 aaKnown RBP6.49□□□□□ -1.37
CDRT1-208ENST00000630868 INPP5BP32019 993 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 RELBQ01201 579 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 MAP3K10Q02779 954 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 NNTQ13423 1086 aa6.49□□□□□ -1.37
CDRT1-208ENST00000630868 IER5Q5VY09 327 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms