RNA–Protein interactions for RNA: ENST00000629960.2

LINC01828-211, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 345 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-211ENST00000629960 TRPA1O75762 1119 aa8.55□□□□□ -1.04
LINC01828-211ENST00000629960 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
LINC01828-211ENST00000629960 ECM1Q16610 540 aa8.55□□□□□ -1.04
LINC01828-211ENST00000629960 NCAPG2Q86XI2 1143 aa8.55□□□□□ -1.04
LINC01828-211ENST00000629960 ARID3AQ99856 593 aa8.55□□□□□ -1.04
LINC01828-211ENST00000629960 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
LINC01828-211ENST00000629960 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
LINC01828-211ENST00000629960 SMARCA2P51531 1590 aa8.54□□□□□ -1.04
LINC01828-211ENST00000629960 SMNDC1O75940 238 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC01828-211ENST00000629960 ABL1P00519 1130 aa8.54□□□□□ -1.04
LINC01828-211ENST00000629960 ALKBH2Q6NS38 261 aa8.54□□□□□ -1.04
LINC01828-211ENST00000629960 TP53INP1Q96A56 240 aa8.54□□□□□ -1.04
LINC01828-211ENST00000629960 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
LINC01828-211ENST00000629960 USTQ9Y2C2 406 aa8.54□□□□□ -1.04
LINC01828-211ENST00000629960 FAM13AO94988 1023 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 EPHA1P21709 976 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 CES1P23141 567 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 CDC27P30260 824 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 SF3B2Q13435 895 aaKnown RBP8.53□□□□□ -1.04
LINC01828-211ENST00000629960 PRSS36Q5K4E3 855 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 CACTIN-AS1Q8N1I8 211 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 TMEM130Q8N3G9 435 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 DZANK1Q9NVP4 752 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
LINC01828-211ENST00000629960 TOP2AP11388 1531 aaKnown RBP8.53□□□□□ -1.04
LINC01828-211ENST00000629960 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
LINC01828-211ENST00000629960 TNFRSF21O75509 655 aa8.52□□□□□ -1.05
LINC01828-211ENST00000629960 PCSK2P16519 638 aa8.52□□□□□ -1.05
LINC01828-211ENST00000629960 CDC25BP30305 580 aa8.52□□□□□ -1.05
LINC01828-211ENST00000629960 SERPINB4P48594 390 aa8.52□□□□□ -1.05
LINC01828-211ENST00000629960 XP32Q5T750 250 aa8.52□□□□□ -1.05
LINC01828-211ENST00000629960 ADAM19Q9H013 955 aa8.52□□□□□ -1.05
LINC01828-211ENST00000629960 SRA1Q9HD15 236 aaKnown RBP8.52□□□□□ -1.05
LINC01828-211ENST00000629960 FOXD3Q9UJU5 478 aaPredicted RBP8.52□□□□□ -1.05
LINC01828-211ENST00000629960 EIF4G1Q04637 1599 aaKnown RBP8.52□□□□□ -1.05
LINC01828-211ENST00000629960 EREGO14944 169 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 WISP1O95388 367 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 AAMPQ13685 434 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 MAP4K3Q8IVH8 894 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 AGGF1Q8N302 714 aaeCLIP8.51□□□□□ -1.05
LINC01828-211ENST00000629960 Q8N3U1 123 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 CARD10Q9BWT7 1032 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 MRPL18Q9H0U6 180 aaKnown RBP8.51□□□□□ -1.05
LINC01828-211ENST00000629960 MUC3BQ9H195 1237 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 AKTIPQ9H8T0 292 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 TIMELESSQ9UNS1 1208 aa8.51□□□□□ -1.05
LINC01828-211ENST00000629960 BAZ1BQ9UIG0 1483 aaKnown RBP8.51□□□□□ -1.05
LINC01828-211ENST00000629960 ICMTO60725 284 aa8.5□□□□□ -1.05
LINC01828-211ENST00000629960 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
LINC01828-211ENST00000629960 GJD3Q8N144 294 aa8.5□□□□□ -1.05
LINC01828-211ENST00000629960 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
LINC01828-211ENST00000629960 PEG3Q9GZU2 1588 aa8.49□□□□□ -1.05
LINC01828-211ENST00000629960 FSCN2O14926 492 aa8.49□□□□□ -1.05
LINC01828-211ENST00000629960 ATAD2BQ9ULI0 1458 aa8.49□□□□□ -1.05
LINC01828-211ENST00000629960 DDX3YO15523 660 aaKnown RBP8.48□□□□□ -1.05
LINC01828-211ENST00000629960 ADAM11O75078 769 aa8.48□□□□□ -1.05
LINC01828-211ENST00000629960 PTPRAP18433 802 aa8.48□□□□□ -1.05
LINC01828-211ENST00000629960 CD68P34810 354 aaPredicted RBP8.48□□□□□ -1.05
LINC01828-211ENST00000629960 ZMYM1Q5SVZ6 1142 aa8.48□□□□□ -1.05
LINC01828-211ENST00000629960 Q6ZS46 218 aa8.48□□□□□ -1.05
LINC01828-211ENST00000629960 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.48□□□□□ -1.05
LINC01828-211ENST00000629960 RETREG2Q8NC44 543 aa8.48□□□□□ -1.05
LINC01828-211ENST00000629960 KLHDC7BQ96G42 594 aa8.48□□□□□ -1.05
LINC01828-211ENST00000629960 EGFL7Q9UHF1 273 aa8.48□□□□□ -1.05
LINC01828-211ENST00000629960 PDE2AO00408 941 aaPredicted RBP8.47□□□□□ -1.05
LINC01828-211ENST00000629960 PHACTR2O75167 634 aa8.47□□□□□ -1.05
LINC01828-211ENST00000629960 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
LINC01828-211ENST00000629960 HGSNATQ68CP4 663 aa8.47□□□□□ -1.05
LINC01828-211ENST00000629960 TTC16Q8NEE8 873 aa8.47□□□□□ -1.05
LINC01828-211ENST00000629960 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
LINC01828-211ENST00000629960 PMEPA1Q969W9 287 aa8.47□□□□□ -1.05
LINC01828-211ENST00000629960 NXPE3Q969Y0 559 aa8.47□□□□□ -1.05
LINC01828-211ENST00000629960 ZKSCAN3Q9BRR0 538 aa8.47□□□□□ -1.05
LINC01828-211ENST00000629960 LATS2Q9NRM7 1088 aa8.47□□□□□ -1.05
LINC01828-211ENST00000629960 USP5P45974 858 aa8.46□□□□□ -1.06
LINC01828-211ENST00000629960 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
LINC01828-211ENST00000629960 TXNDC2Q86VQ3 553 aa8.46□□□□□ -1.06
LINC01828-211ENST00000629960 TMEM102Q8N9M5 508 aaPredicted RBP8.46□□□□□ -1.06
LINC01828-211ENST00000629960 SNX29Q8TEQ0 813 aa8.46□□□□□ -1.06
LINC01828-211ENST00000629960 UBL7Q96S82 380 aaPredicted RBP8.46□□□□□ -1.06
LINC01828-211ENST00000629960 OSMRQ99650 979 aa8.46□□□□□ -1.06
LINC01828-211ENST00000629960 SOX13Q9UN79 622 aa8.46□□□□□ -1.06
LINC01828-211ENST00000629960 EHHADHQ08426 723 aa8.45□□□□□ -1.06
LINC01828-211ENST00000629960 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
LINC01828-211ENST00000629960 ZFYVE28Q9HCC9 887 aa8.45□□□□□ -1.06
LINC01828-211ENST00000629960 H3BRB1 525 aa8.44□□□□□ -1.06
LINC01828-211ENST00000629960 H3BRJ5 948 aa8.44□□□□□ -1.06
LINC01828-211ENST00000629960 POLR3DP05423 398 aaPredicted RBP8.44□□□□□ -1.06
LINC01828-211ENST00000629960 PRR23CQ6ZRP0 262 aa8.44□□□□□ -1.06
LINC01828-211ENST00000629960 KLHL23Q8NBE8 558 aa8.44□□□□□ -1.06
LINC01828-211ENST00000629960 UBASH3BQ8TF42 649 aa8.44□□□□□ -1.06
LINC01828-211ENST00000629960 TUT1Q9H6E5 874 aaKnown RBP8.44□□□□□ -1.06
LINC01828-211ENST00000629960 ACAD11Q709F0 780 aa8.43□□□□□ -1.06
LINC01828-211ENST00000629960 VN1R5Q7Z5H4 357 aa8.43□□□□□ -1.06
LINC01828-211ENST00000629960 DCAF11Q8TEB1 546 aa8.43□□□□□ -1.06
LINC01828-211ENST00000629960 SEC31BQ9NQW1 1179 aa8.43□□□□□ -1.06
LINC01828-211ENST00000629960 CCDC88BA6NC98 1476 aa8.43□□□□□ -1.06
LINC01828-211ENST00000629960 GLB1P16278 677 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms