RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 GRIPAP1Q4V328 841 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 LRRC24Q50LG9 513 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 PUS3Q9BZE2 481 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 DCTPP1Q9H773 170 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 FER1L6Q2WGJ9 1857 aa12.21□□□□□ -0.46
SOX2-OT-249ENST00000628810 HSP90AB4PQ58FF6 505 aa12.2□□□□□ -0.46
SOX2-OT-249ENST00000628810 SLC51AQ86UW1 340 aa12.2□□□□□ -0.46
SOX2-OT-249ENST00000628810 RWDD1Q9H446 243 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-249ENST00000628810 CNNM1Q9NRU3 951 aa12.2□□□□□ -0.46
SOX2-OT-249ENST00000628810 XDHP47989 1333 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 IGHDP01880 384 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 CHRNDQ07001 517 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 ERC1Q8IUD2 1116 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 SMC5Q8IY18 1101 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 RTFDC1Q9BY42 306 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 ANKRD2Q9GZV1 360 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 SIL1Q9H173 461 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 ZNF609O15014 1411 aa12.19□□□□□ -0.46
SOX2-OT-249ENST00000628810 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 LTBP3Q9NS15 1303 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 C21orf2O43822 256 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 SASH1O94885 1247 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 PDE8BO95263 885 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 GPSM2P81274 684 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 PSMD1Q99460 953 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 GPR108Q9NPR9 543 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
SOX2-OT-249ENST00000628810 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 PLCG2P16885 1265 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 YBX3P16989 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 FGFR2P21802 821 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 METTL24Q5JXM2 366 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 OLFM4Q6UX06 510 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 KIF1BPQ96EK5 621 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 PPP4R2Q9NY27 417 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 LEMD3Q9Y2U8 911 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 MED23Q9ULK4 1368 aa12.17□□□□□ -0.46
SOX2-OT-249ENST00000628810 TFCP2Q12800 502 aa12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 OS9Q13438 667 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 UBE4AQ14139 1066 aa12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 C15orf52Q6ZUT6 534 aaKnown RBP12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 MPNDQ8N594 471 aa12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 CEP126Q9P2H0 1117 aa12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-249ENST00000628810 ZNF804BA4D1E1 1349 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 NFKBIEO00221 500 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 TAF5LO75529 589 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 ATP2B4P23634 1241 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 DPP8Q6V1X1 898 aaPredicted RBP12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 LRRCC1Q9C099 1032 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 POLLQ9UGP5 575 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 GGA1Q9UJY5 639 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 NSFL1CQ9UNZ2 370 aaKnown RBP12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 AKAP2Q9Y2D5 859 aa12.15□□□□□ -0.46
SOX2-OT-249ENST00000628810 UFL1O94874 794 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 TNNI3KQ59H18 835 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 CENPQQ7L2Z9 268 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 HELBQ8NG08 1087 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 LPIN2Q92539 896 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 CCDC136Q96JN2 1154 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 WWC3Q9ULE0 1092 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 FPGT-TNNI3KV9GXZ4 949 aa12.14□□□□□ -0.47
SOX2-OT-249ENST00000628810 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
SOX2-OT-249ENST00000628810 TAOK3Q9H2K8 898 aa12.13□□□□□ -0.47
SOX2-OT-249ENST00000628810 COL4A5P29400 1685 aa12.13□□□□□ -0.47
SOX2-OT-249ENST00000628810 A0A1B0GUL7 405 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 WTIPA6NIX2 430 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 SNAP23O00161 211 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 GRIN3BO60391 1043 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 KCNJ4P48050 445 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 PSEN1P49768 467 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 NUCB1Q02818 461 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 KIAA2012Q0VF49 1180 aa12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-249ENST00000628810 EYA3Q99504 573 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms