RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 ZNF804AQ7Z570 1209 aa13.3□□□□□ -0.28
SOX2-OT-245ENST00000628211 COA1Q9GZY4 146 aa13.3□□□□□ -0.28
SOX2-OT-245ENST00000628211 RRAGCQ9HB90 399 aa13.3□□□□□ -0.28
SOX2-OT-245ENST00000628211 RIPOR2Q9Y4F9 1068 aa13.3□□□□□ -0.28
SOX2-OT-245ENST00000628211 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
SOX2-OT-245ENST00000628211 PDE8BO95263 885 aa13.29□□□□□ -0.28
SOX2-OT-245ENST00000628211 RPS12P25398 132 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-245ENST00000628211 RRP1P56182 461 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-245ENST00000628211 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
SOX2-OT-245ENST00000628211 DBNDD1Q9H9R9 158 aa13.29□□□□□ -0.28
SOX2-OT-245ENST00000628211 POTECB2RU33 542 aa13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 DDNO94850 711 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 MMP14P50281 582 aa13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 CXCL9Q07325 125 aa13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 PUM3Q15397 648 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 HACL1Q9UJ83 578 aa13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 COG6Q9Y2V7 657 aa13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 GJA3Q9Y6H8 435 aa13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
SOX2-OT-245ENST00000628211 PLIN1O60240 522 aa13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 HMMRO75330 724 aa13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 TAF5LO75529 589 aa13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 IFIT1P09914 478 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 ATP8B2P98198 1209 aa13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 LRRC24Q50LG9 513 aa13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 PNMA8AQ86V59 439 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 PUS3Q9BZE2 481 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 ZNF646O15015 1829 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-245ENST00000628211 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 YDJCA8MPS7 323 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 RAD17O75943 681 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 SLC5A1P13866 664 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 G3BP1Q13283 466 aaKnown RBP eCLIP13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 POLA2Q14181 598 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 CAVIN4Q5BKX8 364 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 VGLL2Q8N8G2 317 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 AGBL3Q8NEM8 1001 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 KLHDC4Q8TBB5 520 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 SSH3Q8TE77 659 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 DPF2Q92785 391 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 GPR101Q96P66 508 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 AKAP2Q9Y2D5 859 aa13.26□□□□□ -0.29
SOX2-OT-245ENST00000628211 IRS2Q9Y4H2 1338 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 AAMPQ13685 434 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 HSP90AB4PQ58FF6 505 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 CEP85Q6P2H3 762 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 VPS37DQ86XT2 251 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 LPIN2Q92539 896 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 SIL1Q9H173 461 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 ZBTB40Q9NUA8 1239 aa13.25□□□□□ -0.29
SOX2-OT-245ENST00000628211 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 PSMD14O00487 310 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 VIL1P09327 827 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 IL1R1P14778 569 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 EPHX2P34913 555 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 ERC1Q8IUD2 1116 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 TAF1DQ9H5J8 278 aaPredicted RBP13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 GPRC5DQ9NZD1 345 aa13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-245ENST00000628211 ADAMTSL1Q8N6G6 1762 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 H7C1D1 291 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 ZBTB22O15209 634 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 FGFR2P21802 821 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 DSG3P32926 999 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 GMPSP49915 693 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 SCNN1DP51172 638 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 FKBP1AP62942 108 aaKnown RBP13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 RSBN1LQ6PCB5 846 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 USP50Q70EL3 339 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 LDHDQ86WU2 507 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 DNAJC5GQ8N7S2 189 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 ADARB2Q9NS39 739 aaKnown RBP13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 GNL3LQ9NVN8 582 aaKnown RBP13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 NOP58Q9Y2X3 529 aaKnown RBP13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 CEP350Q5VT06 3117 aa13.23□□□□□ -0.29
SOX2-OT-245ENST00000628211 TXNRD3Q86VQ6 643 aa13.22□□□□□ -0.29
SOX2-OT-245ENST00000628211 GPR108Q9NPR9 543 aa13.22□□□□□ -0.29
SOX2-OT-245ENST00000628211 FAM205AQ6ZU69 1335 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 SEMA3EO15041 775 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 SURF6O75683 361 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 SASH1O94885 1247 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 KLRK1P26718 216 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 C20orf194Q5TEA3 1177 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 FBXO33Q7Z6M2 555 aa13.21□□□□□ -0.29
SOX2-OT-245ENST00000628211 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms