RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 SSH3Q8TE77 659 aa9.99□□□□□ -0.81
CHD2-213ENST00000628118 ZNF594Q96JF6 807 aaPredicted RBP9.99□□□□□ -0.81
CHD2-213ENST00000628118 ZBTB40Q9NUA8 1239 aa9.99□□□□□ -0.81
CHD2-213ENST00000628118 ZNRF3Q9ULT6 936 aa9.99□□□□□ -0.81
CHD2-213ENST00000628118 TIAM2Q8IVF5 1701 aa9.99□□□□□ -0.81
CHD2-213ENST00000628118 G3V3G9 751 aa9.98□□□□□ -0.81
CHD2-213ENST00000628118 HMMRO75330 724 aa9.98□□□□□ -0.81
CHD2-213ENST00000628118 PDE8BO95263 885 aa9.98□□□□□ -0.81
CHD2-213ENST00000628118 METTL24Q5JXM2 366 aa9.98□□□□□ -0.81
CHD2-213ENST00000628118 DCAF8Q5TAQ9 597 aa9.98□□□□□ -0.81
CHD2-213ENST00000628118 PODNQ7Z5L7 613 aa9.98□□□□□ -0.81
CHD2-213ENST00000628118 COA1Q9GZY4 146 aa9.98□□□□□ -0.81
CHD2-213ENST00000628118 G3BP1Q13283 466 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHD2-213ENST00000628118 TNIP1Q15025 636 aa9.97□□□□□ -0.81
CHD2-213ENST00000628118 PUM3Q15397 648 aaKnown RBP9.97□□□□□ -0.81
CHD2-213ENST00000628118 LRRC24Q50LG9 513 aa9.97□□□□□ -0.81
CHD2-213ENST00000628118 HSP90AB4PQ58FF6 505 aa9.97□□□□□ -0.81
CHD2-213ENST00000628118 CEP85Q6P2H3 762 aa9.97□□□□□ -0.81
CHD2-213ENST00000628118 GPC2Q8N158 579 aa9.97□□□□□ -0.81
CHD2-213ENST00000628118 PUS3Q9BZE2 481 aaKnown RBP9.97□□□□□ -0.81
CHD2-213ENST00000628118 GPBP1L1Q9HC44 474 aaPredicted RBP9.97□□□□□ -0.81
CHD2-213ENST00000628118 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
CHD2-213ENST00000628118 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
CHD2-213ENST00000628118 A0A1B0GUL6 1792 aa9.96□□□□□ -0.81
CHD2-213ENST00000628118 PNMA6EA0A0J9YXQ4 647 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 IQCA1LA6NCM1 817 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 RIMBP2O15034 1052 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.82
CHD2-213ENST00000628118 MMP14P50281 582 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 C20orf194Q5TEA3 1177 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 CIAPIN1Q6FI81 312 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 ATG9AQ7Z3C6 839 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 ZNF804AQ7Z570 1209 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 SLC51AQ86UW1 340 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 VGLL2Q8N8G2 317 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 ZNF784Q8NCA9 323 aaPredicted RBP9.96□□□□□ -0.82
CHD2-213ENST00000628118 LPIN2Q92539 896 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 L3MBTL3Q96JM7 780 aaPredicted RBP9.96□□□□□ -0.82
CHD2-213ENST00000628118 AKAP2Q9Y2D5 859 aa9.96□□□□□ -0.82
CHD2-213ENST00000628118 NOP58Q9Y2X3 529 aaKnown RBP9.96□□□□□ -0.82
CHD2-213ENST00000628118 ECE2O60344 883 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 TAF5LO75529 589 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 SLC5A1P13866 664 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 RPS12P25398 132 aaKnown RBP9.95□□□□□ -0.82
CHD2-213ENST00000628118 CAVIN4Q5BKX8 364 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 ERC1Q8IUD2 1116 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 KLHDC4Q8TBB5 520 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 C1orf115Q9H7X2 142 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 IRS2Q9Y4H2 1338 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 ZNF609O15014 1411 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 WDR90Q96KV7 1748 aa9.95□□□□□ -0.82
CHD2-213ENST00000628118 SCN4AP35499 1836 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 COL4A5P29400 1685 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 MYO3BQ8WXR4 1341 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 ZNF541Q9H0D2 1346 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 VEGFAP15692 232 aaPredicted RBP9.94□□□□□ -0.82
CHD2-213ENST00000628118 FGFR2P21802 821 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 CXCL9Q07325 125 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 HELBQ8NG08 1087 aaPredicted RBP9.94□□□□□ -0.82
CHD2-213ENST00000628118 DPF2Q92785 391 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 SIL1Q9H173 461 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 DBNDD1Q9H9R9 158 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 CD209Q9NNX6 404 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 GPR108Q9NPR9 543 aa9.94□□□□□ -0.82
CHD2-213ENST00000628118 PA2G4Q9UQ80 394 aaKnown RBP9.94□□□□□ -0.82
CHD2-213ENST00000628118 PSME4Q14997 1843 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 USP17L3A6NCW0 530 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 USP17L4A6NCW7 530 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 YDJCA8MPS7 323 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 RAB11FIP3O75154 756 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 SURF6O75683 361 aaKnown RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 DDNO94850 711 aaPredicted RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 VIL1P09327 827 aaKnown RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 IL1R1P14778 569 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 LMOD1P29536 600 aaPredicted RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 HIBADHP31937 336 aaKnown RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 FKBP1AP62942 108 aaKnown RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 OS9Q13438 667 aaPredicted RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 ATP2B3Q16720 1220 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 DOK7Q18PE1 504 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 STRIP1Q5VSL9 837 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 USP17L1Q7RTZ2 530 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 VPS37DQ86XT2 251 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 AGBL3Q8NEM8 1001 aa9.93□□□□□ -0.82
CHD2-213ENST00000628118 GPR101Q96P66 508 aaPredicted RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 GNL3LQ9NVN8 582 aaKnown RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 SUPT16HQ9Y5B9 1047 aaKnown RBP9.93□□□□□ -0.82
CHD2-213ENST00000628118 SEMA3EO15041 775 aa9.92□□□□□ -0.82
CHD2-213ENST00000628118 FBXO33Q7Z6M2 555 aa9.92□□□□□ -0.82
CHD2-213ENST00000628118 TXNRD3Q86VQ6 643 aa9.92□□□□□ -0.82
CHD2-213ENST00000628118 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
CHD2-213ENST00000628118 TDRD7Q8NHU6 1098 aaKnown RBP9.92□□□□□ -0.82
CHD2-213ENST00000628118 FAM84BQ96KN1 310 aaPredicted RBP9.92□□□□□ -0.82
CHD2-213ENST00000628118 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
CHD2-213ENST00000628118 HACL1Q9UJ83 578 aa9.92□□□□□ -0.82
CHD2-213ENST00000628118 GJA3Q9Y6H8 435 aa9.92□□□□□ -0.82
CHD2-213ENST00000628118 PSMD14O00487 310 aa9.91□□□□□ -0.82
CHD2-213ENST00000628118 RAD17O75943 681 aa9.91□□□□□ -0.82
CHD2-213ENST00000628118 SASH1O94885 1247 aa9.91□□□□□ -0.82
CHD2-213ENST00000628118 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms