RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 PSMD1Q99460 953 aa12.16□□□□□ -0.46
APLF-207ENST00000627740 EYA3Q99504 573 aa12.16□□□□□ -0.46
APLF-207ENST00000627740 RTFDC1Q9BY42 306 aaPredicted RBP12.16□□□□□ -0.46
APLF-207ENST00000627740 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
APLF-207ENST00000627740 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
APLF-207ENST00000627740 MED23Q9ULK4 1368 aa12.15□□□□□ -0.46
APLF-207ENST00000627740 SNAP23O00161 211 aa12.15□□□□□ -0.46
APLF-207ENST00000627740 GORABQ5T7V8 394 aa12.15□□□□□ -0.46
APLF-207ENST00000627740 C15orf52Q6ZUT6 534 aaKnown RBP12.15□□□□□ -0.46
APLF-207ENST00000627740 XAGE2Q96GT9 111 aa12.15□□□□□ -0.46
APLF-207ENST00000627740 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.47
APLF-207ENST00000627740 CAVIN4Q5BKX8 364 aa12.15□□□□□ -0.47
APLF-207ENST00000627740 DBNLQ9UJU6 430 aaKnown RBP12.15□□□□□ -0.47
APLF-207ENST00000627740 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.47
APLF-207ENST00000627740 CHD4Q14839 1912 aa12.14□□□□□ -0.47
APLF-207ENST00000627740 MX1P20591 662 aa12.14□□□□□ -0.47
APLF-207ENST00000627740 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
APLF-207ENST00000627740 CCDC158Q5M9N0 1113 aa12.14□□□□□ -0.47
APLF-207ENST00000627740 VPS37DQ86XT2 251 aa12.14□□□□□ -0.47
APLF-207ENST00000627740 C16orf71Q8IYS4 520 aaPredicted RBP12.14□□□□□ -0.47
APLF-207ENST00000627740 DBNDD2Q9BQY9 259 aa12.14□□□□□ -0.47
APLF-207ENST00000627740 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
APLF-207ENST00000627740 WTIPA6NIX2 430 aaPredicted RBP12.13□□□□□ -0.47
APLF-207ENST00000627740 ADORA1P30542 326 aa12.13□□□□□ -0.47
APLF-207ENST00000627740 ZNF804AQ7Z570 1209 aa12.13□□□□□ -0.47
APLF-207ENST00000627740 ZC3H12CQ9C0D7 883 aaKnown RBP12.13□□□□□ -0.47
APLF-207ENST00000627740 VPS33BQ9H267 617 aa12.13□□□□□ -0.47
APLF-207ENST00000627740 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
APLF-207ENST00000627740 TTC41PQ6P2S7 1318 aa12.13□□□□□ -0.47
APLF-207ENST00000627740 GNL3LQ9NVN8 582 aaKnown RBP12.13□□□□□ -0.47
APLF-207ENST00000627740 SALL3Q9BXA9 1300 aa12.13□□□□□ -0.47
APLF-207ENST00000627740 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
APLF-207ENST00000627740 IRS2Q9Y4H2 1338 aa12.13□□□□□ -0.47
APLF-207ENST00000627740 KLRK1P26718 216 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 PDE4AP27815 886 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 HIBADHP31937 336 aaKnown RBP12.12□□□□□ -0.47
APLF-207ENST00000627740 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
APLF-207ENST00000627740 FAM84BQ96KN1 310 aaPredicted RBP12.12□□□□□ -0.47
APLF-207ENST00000627740 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
APLF-207ENST00000627740 ECHDC1Q9NTX5 307 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
APLF-207ENST00000627740 SBF1O95248 1867 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 ERC2O15083 957 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 GYG1P46976 350 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 PDE1AP54750 535 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 GPR162Q16538 588 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 AOX1Q06278 1338 aa12.12□□□□□ -0.47
APLF-207ENST00000627740 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 G3V3G9 751 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 NFKBIEO00221 500 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 YBX3P16989 372 aaKnown RBP eCLIP12.11□□□□□ -0.47
APLF-207ENST00000627740 BCAMP50895 628 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 TXNRD3Q86VQ6 643 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
APLF-207ENST00000627740 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 GRIN3BO60391 1043 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
APLF-207ENST00000627740 PHKA1P46020 1223 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
APLF-207ENST00000627740 ZNF277Q9NRM2 450 aaPredicted RBP12.11□□□□□ -0.47
APLF-207ENST00000627740 UTRNP46939 3433 aa12.1□□□□□ -0.47
APLF-207ENST00000627740 SEMA3EO15041 775 aa12.1□□□□□ -0.47
APLF-207ENST00000627740 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
APLF-207ENST00000627740 ATP5JP18859 108 aa12.1□□□□□ -0.47
APLF-207ENST00000627740 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
APLF-207ENST00000627740 RGS3P49796 1198 aa12.1□□□□□ -0.47
APLF-207ENST00000627740 AOC3Q16853 763 aa12.1□□□□□ -0.47
APLF-207ENST00000627740 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
APLF-207ENST00000627740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.1□□□□□ -0.47
APLF-207ENST00000627740 PSME4Q14997 1843 aa12.1□□□□□ -0.47
APLF-207ENST00000627740 ZBTB22O15209 634 aa12.09□□□□□ -0.47
APLF-207ENST00000627740 FRAT2O75474 233 aaPredicted RBP12.09□□□□□ -0.47
APLF-207ENST00000627740 IL1R1P14778 569 aa12.09□□□□□ -0.47
APLF-207ENST00000627740 RASSF7Q02833 373 aa12.09□□□□□ -0.47
APLF-207ENST00000627740 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
APLF-207ENST00000627740 PI4K2BQ8TCG2 481 aa12.09□□□□□ -0.47
APLF-207ENST00000627740 CD209Q9NNX6 404 aa12.09□□□□□ -0.47
APLF-207ENST00000627740 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
APLF-207ENST00000627740 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 SKAP1Q86WV1 359 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 PDS5AQ29RF7 1337 aaKnown RBP12.08□□□□□ -0.48
APLF-207ENST00000627740 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 ECE2O60344 883 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 LMNB1P20700 586 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 MCAMP43121 646 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 RASGRF1Q13972 1273 aa12.08□□□□□ -0.48
APLF-207ENST00000627740 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms