RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 PCCAP05165 728 aaPredicted RBP13.75□□□□□ -0.21
TCF4-253ENST00000626466 FKBP1BP68106 108 aa13.75□□□□□ -0.21
TCF4-253ENST00000626466 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
TCF4-253ENST00000626466 RALBP1Q15311 655 aa13.75□□□□□ -0.21
TCF4-253ENST00000626466 CCDC152Q4G0S7 254 aa13.75□□□□□ -0.21
TCF4-253ENST00000626466 FZD1Q9UP38 647 aa13.75□□□□□ -0.21
TCF4-253ENST00000626466 SASH1O94885 1247 aa13.74□□□□□ -0.21
TCF4-253ENST00000626466 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
TCF4-253ENST00000626466 KLRK1P26718 216 aa13.74□□□□□ -0.21
TCF4-253ENST00000626466 DACT2Q5SW24 774 aa13.74□□□□□ -0.21
TCF4-253ENST00000626466 TXNRD3Q86VQ6 643 aa13.74□□□□□ -0.21
TCF4-253ENST00000626466 ANKRD18AQ8IVF6 992 aa13.74□□□□□ -0.21
TCF4-253ENST00000626466 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
TCF4-253ENST00000626466 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
TCF4-253ENST00000626466 GPR25O00155 361 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 WNT10BO00744 389 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 PRKG1Q13976 671 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 C8orf58Q8NAV2 365 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 FBXW7Q969H0 707 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 GREM2Q9H772 168 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 CWC25Q9NXE8 425 aaPredicted RBP13.73□□□□□ -0.21
TCF4-253ENST00000626466 HDAC9Q9UKV0 1011 aa13.73□□□□□ -0.21
TCF4-253ENST00000626466 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
TCF4-253ENST00000626466 SPEF2Q9C093 1822 aa13.72□□□□□ -0.21
TCF4-253ENST00000626466 IGKV5-2P06315 115 aa13.72□□□□□ -0.21
TCF4-253ENST00000626466 CTSWP56202 376 aa13.72□□□□□ -0.21
TCF4-253ENST00000626466 PTPN12Q05209 780 aaKnown RBP13.72□□□□□ -0.21
TCF4-253ENST00000626466 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
TCF4-253ENST00000626466 POLA2Q14181 598 aa13.72□□□□□ -0.21
TCF4-253ENST00000626466 METTL22Q9BUU2 404 aaPredicted RBP13.72□□□□□ -0.21
TCF4-253ENST00000626466 MINPP1Q9UNW1 487 aa13.72□□□□□ -0.21
TCF4-253ENST00000626466 PDE4DIPQ5VU43 2346 aa13.72□□□□□ -0.21
TCF4-253ENST00000626466 TM4SF4P48230 202 aa13.71□□□□□ -0.21
TCF4-253ENST00000626466 PODNQ7Z5L7 613 aa13.71□□□□□ -0.21
TCF4-253ENST00000626466 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
TCF4-253ENST00000626466 MAP3K2Q9Y2U5 619 aa13.71□□□□□ -0.21
TCF4-253ENST00000626466 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.22
TCF4-253ENST00000626466 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
TCF4-253ENST00000626466 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
TCF4-253ENST00000626466 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
TCF4-253ENST00000626466 PCDHAC2Q9Y5I4 1007 aa13.7□□□□□ -0.22
TCF4-253ENST00000626466 CCT4P50991 539 aaKnown RBP13.69□□□□□ -0.22
TCF4-253ENST00000626466 PKN2Q16513 984 aaKnown RBP13.69□□□□□ -0.22
TCF4-253ENST00000626466 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
TCF4-253ENST00000626466 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
TCF4-253ENST00000626466 ZBED3Q96IU2 234 aaPredicted RBP13.69□□□□□ -0.22
TCF4-253ENST00000626466 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
TCF4-253ENST00000626466 AOX1Q06278 1338 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 SNAP23O00161 211 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 APAF1O14727 1248 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
TCF4-253ENST00000626466 LDLRAD1Q5T700 205 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 STRIP1Q5VSL9 837 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 SPRYD7Q5W111 196 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 CLMNQ96JQ2 1002 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
TCF4-253ENST00000626466 BSDC1Q9NW68 430 aaPredicted RBP13.68□□□□□ -0.22
TCF4-253ENST00000626466 IFT57Q9NWB7 429 aa13.68□□□□□ -0.22
TCF4-253ENST00000626466 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
TCF4-253ENST00000626466 FKTNO75072 461 aa13.67□□□□□ -0.22
TCF4-253ENST00000626466 CAP1Q01518 475 aa13.67□□□□□ -0.22
TCF4-253ENST00000626466 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
TCF4-253ENST00000626466 NOM1Q5C9Z4 860 aaKnown RBP13.67□□□□□ -0.22
TCF4-253ENST00000626466 CERS5Q8N5B7 392 aa13.67□□□□□ -0.22
TCF4-253ENST00000626466 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
TCF4-253ENST00000626466 ANGEL1Q9UNK9 670 aaKnown RBP13.67□□□□□ -0.22
TCF4-253ENST00000626466 PI4KAP2A4QPH2 592 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 IGF2BP3O00425 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
TCF4-253ENST00000626466 NF2P35240 595 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 G2E3Q7L622 706 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 UBE3BQ7Z3V4 1068 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 PI4KAP1Q8N8J0 262 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 CFHR5Q9BXR6 569 aa13.66□□□□□ -0.22
TCF4-253ENST00000626466 IRS2Q9Y4H2 1338 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 GJA5P36382 358 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 GNAI1P63096 354 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 GTF2IP78347 998 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 SREBF2Q12772 1141 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 KSR2Q6VAB6 950 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 OTOP1Q7RTM1 612 aa13.65□□□□□ -0.22
TCF4-253ENST00000626466 APOBEC3FQ8IUX4 373 aaKnown RBP13.65□□□□□ -0.22
TCF4-253ENST00000626466 ZNF804BA4D1E1 1349 aa13.64□□□□□ -0.23
TCF4-253ENST00000626466 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
TCF4-253ENST00000626466 DDX58O95786 925 aaKnown RBP13.64□□□□□ -0.23
TCF4-253ENST00000626466 CASP7P55210 303 aa13.64□□□□□ -0.23
TCF4-253ENST00000626466 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
TCF4-253ENST00000626466 TTLL5Q6EMB2 1281 aa13.64□□□□□ -0.23
TCF4-253ENST00000626466 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
TCF4-253ENST00000626466 TSR2Q969E8 191 aaKnown RBP13.64□□□□□ -0.23
TCF4-253ENST00000626466 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
TCF4-253ENST00000626466 CLRN2A0PK11 232 aa13.63□□□□□ -0.23
TCF4-253ENST00000626466 H7C1W4 665 aa13.63□□□□□ -0.23
TCF4-253ENST00000626466 ITGA6P23229 1130 aa13.63□□□□□ -0.23
TCF4-253ENST00000626466 WNK4Q96J92 1243 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms