RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 PSMD14O00487 310 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 EPHX2P34913 555 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 C1QTNF8P60827 252 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 UBE4AQ14139 1066 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 PUM3Q15397 648 aaKnown RBP11.47□□□□□ -0.57
NELFE-214ENST00000625905 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
NELFE-214ENST00000625905 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 PODNQ7Z5L7 613 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 TXNRD3Q86VQ6 643 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
NELFE-214ENST00000625905 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 TAF1DQ9H5J8 278 aaPredicted RBP11.47□□□□□ -0.57
NELFE-214ENST00000625905 GPRC5DQ9NZD1 345 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 PA2G4Q9UQ80 394 aaKnown RBP11.47□□□□□ -0.57
NELFE-214ENST00000625905 COG6Q9Y2V7 657 aa11.47□□□□□ -0.57
NELFE-214ENST00000625905 ZNF646O15015 1829 aaPredicted RBP11.46□□□□□ -0.57
NELFE-214ENST00000625905 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.57
NELFE-214ENST00000625905 IRS2Q9Y4H2 1338 aa11.46□□□□□ -0.57
NELFE-214ENST00000625905 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NELFE-214ENST00000625905 PDE8BO95263 885 aa11.46□□□□□ -0.57
NELFE-214ENST00000625905 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
NELFE-214ENST00000625905 IL15P40933 162 aaPredicted RBP11.46□□□□□ -0.57
NELFE-214ENST00000625905 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
NELFE-214ENST00000625905 EAPPQ56P03 285 aaPredicted RBP11.46□□□□□ -0.57
NELFE-214ENST00000625905 VGLL2Q8N8G2 317 aa11.46□□□□□ -0.57
NELFE-214ENST00000625905 SMC1BQ8NDV3 1235 aa11.46□□□□□ -0.57
NELFE-214ENST00000625905 CHMP4BQ9H444 224 aaKnown RBP11.46□□□□□ -0.57
NELFE-214ENST00000625905 COPRSQ9NQ92 184 aa11.46□□□□□ -0.57
NELFE-214ENST00000625905 ARAP2Q8WZ64 1704 aa11.46□□□□□ -0.58
NELFE-214ENST00000625905 PNMA6EA0A0J9YXQ4 647 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 EPS15P42566 896 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 RRP1P56182 461 aaKnown RBP11.45□□□□□ -0.58
NELFE-214ENST00000625905 C20orf194Q5TEA3 1177 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 ATG9AQ7Z3C6 839 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 PNMA8AQ86V59 439 aaPredicted RBP11.45□□□□□ -0.58
NELFE-214ENST00000625905 LDHDQ86WU2 507 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 MICALL2Q8IY33 904 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 KCNQ5Q9NR82 932 aa11.45□□□□□ -0.58
NELFE-214ENST00000625905 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
NELFE-214ENST00000625905 MYO3BQ8WXR4 1341 aa11.44□□□□□ -0.58
NELFE-214ENST00000625905 VIL1P09327 827 aaKnown RBP11.44□□□□□ -0.58
NELFE-214ENST00000625905 IFIT1P09914 478 aaKnown RBP11.44□□□□□ -0.58
NELFE-214ENST00000625905 SLC5A1P13866 664 aa11.44□□□□□ -0.58
NELFE-214ENST00000625905 FSTL1Q12841 308 aa11.44□□□□□ -0.58
NELFE-214ENST00000625905 RSBN1LQ6PCB5 846 aaPredicted RBP11.44□□□□□ -0.58
NELFE-214ENST00000625905 VPS37DQ86XT2 251 aa11.44□□□□□ -0.58
NELFE-214ENST00000625905 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
NELFE-214ENST00000625905 ADARB2Q9NS39 739 aaKnown RBP11.44□□□□□ -0.58
NELFE-214ENST00000625905 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
NELFE-214ENST00000625905 H7C1D1 291 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 IL1R1P14778 569 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 HIBADHP31937 336 aaKnown RBP11.43□□□□□ -0.58
NELFE-214ENST00000625905 GYG1P46976 350 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 POLA2Q14181 598 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 ATP2B3Q16720 1220 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 CAVIN4Q5BKX8 364 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 STRIP1Q5VSL9 837 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 CEP85Q6P2H3 762 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 AGBL3Q8NEM8 1001 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 LPIN2Q92539 896 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 DPF2Q92785 391 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
NELFE-214ENST00000625905 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
NELFE-214ENST00000625905 SHTN1A0MZ66 631 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 FGFR2P21802 821 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 GTF2IP78347 998 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 ATP8B2P98198 1209 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
NELFE-214ENST00000625905 DACT2Q5SW24 774 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 TTLL5Q6EMB2 1281 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 USP50Q70EL3 339 aaPredicted RBP11.42□□□□□ -0.58
NELFE-214ENST00000625905 SSH3Q8TE77 659 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 MYH13Q9UKX3 1938 aa11.42□□□□□ -0.58
NELFE-214ENST00000625905 USP17L8P0C7I0 530 aa11.41□□□□□ -0.58
NELFE-214ENST00000625905 G3BP1Q13283 466 aaKnown RBP eCLIP11.41□□□□□ -0.58
NELFE-214ENST00000625905 KIF4BQ2VIQ3 1234 aa11.41□□□□□ -0.58
NELFE-214ENST00000625905 TRPM4Q8TD43 1214 aa11.41□□□□□ -0.58
NELFE-214ENST00000625905 FAM84BQ96KN1 310 aaPredicted RBP11.41□□□□□ -0.58
NELFE-214ENST00000625905 MXD3Q9BW11 206 aa11.41□□□□□ -0.58
NELFE-214ENST00000625905 ZBTB40Q9NUA8 1239 aa11.41□□□□□ -0.58
NELFE-214ENST00000625905 JAG2Q9Y219 1238 aa11.41□□□□□ -0.58
NELFE-214ENST00000625905 AKAP2Q9Y2D5 859 aa11.41□□□□□ -0.58
NELFE-214ENST00000625905 HMMRO75330 724 aa11.4□□□□□ -0.58
NELFE-214ENST00000625905 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
NELFE-214ENST00000625905 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.58
NELFE-214ENST00000625905 ZNF280AP59817 542 aaPredicted RBP11.4□□□□□ -0.58
NELFE-214ENST00000625905 TFCP2Q12800 502 aa11.4□□□□□ -0.58
NELFE-214ENST00000625905 TBC1D10BQ4KMP7 808 aaPredicted RBP11.4□□□□□ -0.58
NELFE-214ENST00000625905 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.58
NELFE-214ENST00000625905 KIAA0825Q8IV33 1275 aa11.4□□□□□ -0.58
NELFE-214ENST00000625905 OGFOD1Q8N543 542 aa11.4□□□□□ -0.58
NELFE-214ENST00000625905 TDRD7Q8NHU6 1098 aaKnown RBP11.4□□□□□ -0.58
NELFE-214ENST00000625905 GMLQ99445 158 aa11.4□□□□□ -0.58
NELFE-214ENST00000625905 COL1A1P02452 1464 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms