RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
LINC00963-217ENST00000624009 GPR101Q96P66 508 aaPredicted RBP15.63■□□□□ 0.09
LINC00963-217ENST00000624009 MROH5Q6ZUA9 1318 aa15.63■□□□□ 0.09
LINC00963-217ENST00000624009 IRS2Q9Y4H2 1338 aa15.63■□□□□ 0.09
LINC00963-217ENST00000624009 TMEM88BA6NKF7 163 aa15.62■□□□□ 0.09
LINC00963-217ENST00000624009 ZNF280AP59817 542 aaPredicted RBP15.62■□□□□ 0.09
LINC00963-217ENST00000624009 UBE4AQ14139 1066 aa15.62■□□□□ 0.09
LINC00963-217ENST00000624009 MAP1SQ66K74 1059 aaPredicted RBP15.62■□□□□ 0.09
LINC00963-217ENST00000624009 GMLQ99445 158 aa15.62■□□□□ 0.09
LINC00963-217ENST00000624009 KCNQ5Q9NR82 932 aa15.62■□□□□ 0.09
LINC00963-217ENST00000624009 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
LINC00963-217ENST00000624009 CNNM1Q9NRU3 951 aa15.61■□□□□ 0.09
LINC00963-217ENST00000624009 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
LINC00963-217ENST00000624009 RIPOR2Q9Y4F9 1068 aa15.61■□□□□ 0.09
LINC00963-217ENST00000624009 UBTFL1P0CB47 393 aaPredicted RBP15.6■□□□□ 0.09
LINC00963-217ENST00000624009 HIRAP54198 1017 aaPredicted RBP15.6■□□□□ 0.09
LINC00963-217ENST00000624009 ATF7IPQ6VMQ6 1270 aa15.6■□□□□ 0.09
LINC00963-217ENST00000624009 ZNF804AQ7Z570 1209 aa15.6■□□□□ 0.09
LINC00963-217ENST00000624009 TXNRD3Q86VQ6 643 aa15.6■□□□□ 0.09
LINC00963-217ENST00000624009 WTIPA6NIX2 430 aaPredicted RBP15.59■□□□□ 0.09
LINC00963-217ENST00000624009 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
LINC00963-217ENST00000624009 IL1R1P14778 569 aa15.59■□□□□ 0.09
LINC00963-217ENST00000624009 FKBP1AP62942 108 aaKnown RBP15.59■□□□□ 0.09
LINC00963-217ENST00000624009 DACT2Q5SW24 774 aa15.59■□□□□ 0.09
LINC00963-217ENST00000624009 CDC37L1Q7L3B6 337 aa15.59■□□□□ 0.09
LINC00963-217ENST00000624009 TRPM4Q8TD43 1214 aa15.59■□□□□ 0.09
LINC00963-217ENST00000624009 ZNF594Q96JF6 807 aaPredicted RBP15.59■□□□□ 0.09
LINC00963-217ENST00000624009 TAF5LO75529 589 aa15.58■□□□□ 0.08
LINC00963-217ENST00000624009 GNAI3P08754 354 aa15.58■□□□□ 0.08
LINC00963-217ENST00000624009 TRIM27P14373 513 aa15.58■□□□□ 0.08
LINC00963-217ENST00000624009 TTLL5Q6EMB2 1281 aa15.58■□□□□ 0.08
LINC00963-217ENST00000624009 CD209Q9NNX6 404 aa15.58■□□□□ 0.08
LINC00963-217ENST00000624009 ECM29Q5VYK3 1845 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 HTRA3P83110 453 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 KIF4BQ2VIQ3 1234 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 SAMD7Q7Z3H4 446 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 OGFOD1Q8N543 542 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 PITPNM2Q9BZ72 1349 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 CNTNAP1P78357 1384 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 ARAP2Q8WZ64 1704 aa15.57■□□□□ 0.08
LINC00963-217ENST00000624009 SHTN1A0MZ66 631 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 RASSF10A6NK89 507 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 CIAO1O76071 339 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 KLRK1P26718 216 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 RFX5P48382 616 aaPredicted RBP15.56■□□□□ 0.08
LINC00963-217ENST00000624009 MTX1Q13505 466 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 ZKSCAN2Q63HK3 967 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 VGLL2Q8N8G2 317 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 HELBQ8NG08 1087 aaPredicted RBP15.56■□□□□ 0.08
LINC00963-217ENST00000624009 MYH13Q9UKX3 1938 aa15.56■□□□□ 0.08
LINC00963-217ENST00000624009 BCAR3O75815 825 aa15.55■□□□□ 0.08
LINC00963-217ENST00000624009 SASH1O94885 1247 aa15.55■□□□□ 0.08
LINC00963-217ENST00000624009 PDE8BO95263 885 aa15.55■□□□□ 0.08
LINC00963-217ENST00000624009 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
LINC00963-217ENST00000624009 TBC1D10BQ4KMP7 808 aaPredicted RBP15.55■□□□□ 0.08
LINC00963-217ENST00000624009 DCPSQ96C86 337 aaKnown RBP15.55■□□□□ 0.08
LINC00963-217ENST00000624009 HHIPL1Q96JK4 782 aa15.55■□□□□ 0.08
LINC00963-217ENST00000624009 PUS3Q9BZE2 481 aaKnown RBP15.55■□□□□ 0.08
LINC00963-217ENST00000624009 MYOZ2Q9NPC6 264 aa15.55■□□□□ 0.08
LINC00963-217ENST00000624009 FAM205AQ6ZU69 1335 aa15.54■□□□□ 0.08
LINC00963-217ENST00000624009 EYA2O00167 538 aa15.54■□□□□ 0.08
LINC00963-217ENST00000624009 ZBTB22O15209 634 aa15.54■□□□□ 0.08
LINC00963-217ENST00000624009 EGFRP00533 1210 aa15.54■□□□□ 0.08
LINC00963-217ENST00000624009 HDAC9Q9UKV0 1011 aa15.54■□□□□ 0.08
LINC00963-217ENST00000624009 HIBADHP31937 336 aaKnown RBP15.53■□□□□ 0.08
LINC00963-217ENST00000624009 GTF2IP78347 998 aa15.53■□□□□ 0.08
LINC00963-217ENST00000624009 PUM3Q15397 648 aaKnown RBP15.53■□□□□ 0.08
LINC00963-217ENST00000624009 METTL24Q5JXM2 366 aa15.53■□□□□ 0.08
LINC00963-217ENST00000624009 CST9Q5W186 159 aa15.53■□□□□ 0.08
LINC00963-217ENST00000624009 KRT26Q7Z3Y9 468 aa15.53■□□□□ 0.08
LINC00963-217ENST00000624009 TDRD7Q8NHU6 1098 aaKnown RBP15.53■□□□□ 0.08
LINC00963-217ENST00000624009 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
LINC00963-217ENST00000624009 MEIS3Q99687 375 aa15.53■□□□□ 0.08
LINC00963-217ENST00000624009 GLIS2Q9BZE0 524 aaPredicted RBP15.53■□□□□ 0.08
LINC00963-217ENST00000624009 COPRSQ9NQ92 184 aa15.53■□□□□ 0.08
LINC00963-217ENST00000624009 LRRFIP2Q9Y608 721 aaKnown RBP15.53■□□□□ 0.08
LINC00963-217ENST00000624009 SNAP23O00161 211 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 PLIN1O60240 522 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 DEFB115Q30KQ5 88 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 LRRC24Q50LG9 513 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 FBXO33Q7Z6M2 555 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 SULF1Q8IWU6 871 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 MTMR14Q8NCE2 650 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.08
LINC00963-217ENST00000624009 TLL2Q9Y6L7 1015 aa15.52■□□□□ 0.08
LINC00963-217ENST00000624009 THSD7BQ9C0I4 1608 aa15.51■□□□□ 0.07
LINC00963-217ENST00000624009 TRAF5O00463 557 aa15.51■□□□□ 0.07
LINC00963-217ENST00000624009 FGFR2P21802 821 aa15.51■□□□□ 0.07
LINC00963-217ENST00000624009 SCARF1Q14162 830 aa15.51■□□□□ 0.07
LINC00963-217ENST00000624009 ATG9AQ7Z3C6 839 aa15.51■□□□□ 0.07
LINC00963-217ENST00000624009 ZBED3Q96IU2 234 aaPredicted RBP15.51■□□□□ 0.07
LINC00963-217ENST00000624009 GGA3Q9NZ52 723 aa15.51■□□□□ 0.07
LINC00963-217ENST00000624009 CELF2O95319 508 aaKnown RBP15.5■□□□□ 0.07
LINC00963-217ENST00000624009 GNAI2P04899 355 aa15.5■□□□□ 0.07
LINC00963-217ENST00000624009 IFIT1P09914 478 aaKnown RBP15.5■□□□□ 0.07
LINC00963-217ENST00000624009 IL15P40933 162 aaPredicted RBP15.5■□□□□ 0.07
LINC00963-217ENST00000624009 ECE1P42892 770 aa15.5■□□□□ 0.07
LINC00963-217ENST00000624009 RBM26Q5T8P6 1007 aaKnown RBP15.5■□□□□ 0.07
LINC00963-217ENST00000624009 SAPCD2Q86UD0 394 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms