RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 RNASELQ05823 741 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 DPP9Q86TI2 863 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 BBS5Q8N3I7 341 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 SECISBP2LQ93073 1101 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 TTC1Q99614 292 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 HEXIM1O94992 359 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 KRT85P78386 507 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 KRT33BQ14525 404 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 USP25Q9UHP3 1055 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 WWC3Q9ULE0 1092 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 XPOTO43592 962 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 E7EVH7 732 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 DPP8Q6V1X1 898 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 LDHAL6AQ6ZMR3 332 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 PATL1Q86TB9 770 aaKnown RBP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 NIP7Q9Y221 180 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDKL5-205ENST00000623535 IFT140Q96RY7 1462 aa7.12□□□□□ -1.27
CDKL5-205ENST00000623535 PTPDC1A2A3K4 754 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 YARSP54577 528 aaKnown RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 TRPC5Q9UL62 973 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 FANCAO15360 1455 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 GNPTABQ3T906 1256 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 KIFAP3Q92845 792 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 PIDD1Q9HB75 910 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 M0R2C6 588 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 PRKAR2BP31323 418 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 RPRD2Q5VT52 1461 aaKnown RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 EXOC8Q8IYI6 725 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 KDM2BQ8NHM5 1336 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 RRP36Q96EU6 259 aaKnown RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 IFIT3O14879 490 aaKnown RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 RAB11FIP3O75154 756 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 ZCRB1Q8TBF4 217 aaKnown RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 TEKT1Q969V4 418 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 EVA1BQ9NVM1 165 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 RMND1Q9NWS8 449 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 NSFL1CQ9UNZ2 370 aaKnown RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 GOLGA8FQ08AF8 430 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 GOLGA8DPQ0D2H9 430 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 SUPT20HL1Q3ZLR7 823 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 IFT81Q8WYA0 676 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 GBP3Q9H0R5 595 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 CNNM2Q9H8M5 875 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 EIF4G3O43432 1585 aaKnown RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 RASA3Q14644 834 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 KIAA0753Q2KHM9 967 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 IL2RBP14784 551 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 RILPL1Q5EBL4 403 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 SPECC1LQ69YQ0 1117 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC63Q8NA47 563 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 KIF9Q9HAQ2 790 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 CNPY2Q9Y2B0 182 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 MRVI1Q9Y6F6 885 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 GRIN3BO60391 1043 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC192P0DO97 292 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 CFAP157Q5JU67 520 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 TAF3Q5VWG9 929 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 HS6ST3Q8IZP7 471 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 ADPGKQ9BRR6 497 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 ATP8B3O60423 1300 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 A0A1W2PRG0 241 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 HSF2BPO75031 334 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 ZNF165P49910 485 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 NDUFAF2Q8N183 169 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 PTPREP23469 700 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 NAA16Q6N069 864 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-205ENST00000623535 GCC1Q96CN9 775 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 CSRNP2Q9H175 543 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 EXOC1Q9NV70 894 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 RAB23Q9ULC3 237 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 CD109Q6YHK3 1445 aa7.11□□□□□ -1.27
CDKL5-205ENST00000623535 GPTP24298 496 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 MTIF2P46199 727 aaKnown RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 UBXN2AP68543 259 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC155Q8N6L0 562 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 ACRBPQ8NEB7 543 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 IPO11Q9UI26 975 aaKnown RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 CCDC171Q6TFL3 1326 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 POLR3GO15318 223 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 IRAK1BP1Q5VVH5 260 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 SYNJ1O43426 1573 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 CEBPZQ03701 1054 aaKnown RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 TAF11Q15544 211 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 SMC6Q96SB8 1091 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 UHRF1BP1Q6BDS2 1440 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 CDR2Q01850 454 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 HERC4Q5GLZ8 1057 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 PALM2Q8IXS6 379 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 ESR2Q92731 530 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 SWAP70Q9UH65 585 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 YEATS4O95619 227 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 GNAT2P19087 354 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 DLGAP5Q15398 846 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 KHDRBS2Q5VWX1 349 aaKnown RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 GSTA5Q7RTV2 222 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 COPRSQ9NQ92 184 aa7.1□□□□□ -1.27
CDKL5-205ENST00000623535 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
CDKL5-205ENST00000623535 LDHBP07195 334 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms