RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TBC1D16Q8TBP0 767 aa24.44■■□□□ 1.5
PDLIM2-221ENST00000622702 COL4A5P29400 1685 aa24.43■■□□□ 1.5
PDLIM2-221ENST00000622702 PUM3Q15397 648 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-221ENST00000622702 IL1RAPL2Q9NP60 686 aa24.43■■□□□ 1.5
PDLIM2-221ENST00000622702 GGA1Q9UJY5 639 aa24.43■■□□□ 1.5
PDLIM2-221ENST00000622702 AKAP2Q9Y2D5 859 aa24.43■■□□□ 1.5
PDLIM2-221ENST00000622702 LEMD3Q9Y2U8 911 aa24.43■■□□□ 1.5
PDLIM2-221ENST00000622702 UFL1O94874 794 aa24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 FGFR2P21802 821 aa24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 KIAA2012Q0VF49 1180 aa24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 UBE4AQ14139 1066 aa24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 TNNI3KQ59H18 835 aa24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 CLASRPQ8N2M8 674 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 GPBP1L1Q9HC44 474 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 FPGT-TNNI3KV9GXZ4 949 aa24.42■■□□□ 1.5
PDLIM2-221ENST00000622702 SMARCA5O60264 1052 aaPredicted RBP24.41■■□□□ 1.5
PDLIM2-221ENST00000622702 ATP2B4P23634 1241 aa24.41■■□□□ 1.5
PDLIM2-221ENST00000622702 WASHC4Q2M389 1173 aa24.41■■□□□ 1.5
PDLIM2-221ENST00000622702 GPR101Q96P66 508 aaPredicted RBP24.41■■□□□ 1.5
PDLIM2-221ENST00000622702 ZBTB47Q9UFB7 747 aaPredicted RBP24.41■■□□□ 1.5
PDLIM2-221ENST00000622702 RIMBP2O15034 1052 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 ATP2B3Q16720 1220 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 DPY19L2Q6NUT2 758 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 NIM1KQ8IY84 436 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 LPIN2Q92539 896 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 EYA3Q99504 573 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 ZNF609O15014 1411 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 ZNF804BA4D1E1 1349 aa24.4■■□□□ 1.5
PDLIM2-221ENST00000622702 GLTPD2A6NH11 291 aa24.39■■□□□ 1.5
PDLIM2-221ENST00000622702 EAF2Q96CJ1 260 aaPredicted RBP24.39■■□□□ 1.5
PDLIM2-221ENST00000622702 A0A1B0GUL7 405 aa24.38■■□□□ 1.49
PDLIM2-221ENST00000622702 WTIPA6NIX2 430 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-221ENST00000622702 FZD9O00144 591 aa24.38■■□□□ 1.49
PDLIM2-221ENST00000622702 KCNJ4P48050 445 aa24.38■■□□□ 1.49
PDLIM2-221ENST00000622702 ZC3H12CQ9C0D7 883 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-221ENST00000622702 SNAP23O00161 211 aa24.38■■□□□ 1.49
PDLIM2-221ENST00000622702 LNPKQ9C0E8 428 aa24.38■■□□□ 1.49
PDLIM2-221ENST00000622702 ZNF541Q9H0D2 1346 aa24.37■■□□□ 1.49
PDLIM2-221ENST00000622702 IFIT1P09914 478 aaKnown RBP24.37■■□□□ 1.49
PDLIM2-221ENST00000622702 SLC5A1P13866 664 aa24.37■■□□□ 1.49
PDLIM2-221ENST00000622702 TIMM10P62072 90 aa24.37■■□□□ 1.49
PDLIM2-221ENST00000622702 AACSQ86V21 672 aa24.37■■□□□ 1.49
PDLIM2-221ENST00000622702 DDNO94850 711 aaPredicted RBP24.36■■□□□ 1.49
PDLIM2-221ENST00000622702 EIF6P56537 245 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-221ENST00000622702 C15orf52Q6ZUT6 534 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-221ENST00000622702 ZNRF3Q9ULT6 936 aa24.36■■□□□ 1.49
PDLIM2-221ENST00000622702 IRS2Q9Y4H2 1338 aa24.35■■□□□ 1.49
PDLIM2-221ENST00000622702 NMRK2Q9NPI5 230 aa24.35■■□□□ 1.49
PDLIM2-221ENST00000622702 MED23Q9ULK4 1368 aa24.34■■□□□ 1.49
PDLIM2-221ENST00000622702 IFIT2P09913 472 aaKnown RBP24.34■■□□□ 1.49
PDLIM2-221ENST00000622702 DOK7Q18PE1 504 aa24.34■■□□□ 1.49
PDLIM2-221ENST00000622702 NEUROD6Q96NK8 337 aa24.34■■□□□ 1.49
PDLIM2-221ENST00000622702 DBNDD1Q9H9R9 158 aa24.34■■□□□ 1.49
PDLIM2-221ENST00000622702 DBNLQ9UJU6 430 aaKnown RBP24.34■■□□□ 1.49
PDLIM2-221ENST00000622702 ARAP2Q8WZ64 1704 aa24.34■■□□□ 1.49
PDLIM2-221ENST00000622702 XAGE2Q96GT9 111 aa24.33■■□□□ 1.49
PDLIM2-221ENST00000622702 DBNDD2Q9BQY9 259 aa24.33■■□□□ 1.49
PDLIM2-221ENST00000622702 CCDC8Q9H0W5 538 aaPredicted RBP24.33■■□□□ 1.49
PDLIM2-221ENST00000622702 RRAGCQ9HB90 399 aa24.33■■□□□ 1.49
PDLIM2-221ENST00000622702 G3V3G9 751 aa24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 DCAF8Q5TAQ9 597 aa24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 C16orf71Q8IYS4 520 aaPredicted RBP24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 TLR7Q9NYK1 1049 aaKnown RBP24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 GJA3Q9Y6H8 435 aa24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 KLRK1P26718 216 aa24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 ADORA1P30542 326 aa24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 BCL11AQ9H165 835 aa24.32■■□□□ 1.48
PDLIM2-221ENST00000622702 SALL3Q9BXA9 1300 aa24.31■■□□□ 1.48
PDLIM2-221ENST00000622702 YDJCA8MPS7 323 aa24.31■■□□□ 1.48
PDLIM2-221ENST00000622702 ECE2O60344 883 aa24.31■■□□□ 1.48
PDLIM2-221ENST00000622702 CXCL9Q07325 125 aa24.31■■□□□ 1.48
PDLIM2-221ENST00000622702 GPC2Q8N158 579 aa24.31■■□□□ 1.48
PDLIM2-221ENST00000622702 WDR90Q96KV7 1748 aa24.3■■□□□ 1.48
PDLIM2-221ENST00000622702 PDE4AP27815 886 aa24.3■■□□□ 1.48
PDLIM2-221ENST00000622702 TXNRD3Q86VQ6 643 aa24.3■■□□□ 1.48
PDLIM2-221ENST00000622702 OTUD7AQ8TE49 926 aaPredicted RBP24.3■■□□□ 1.48
PDLIM2-221ENST00000622702 FAM84BQ96KN1 310 aaPredicted RBP24.3■■□□□ 1.48
PDLIM2-221ENST00000622702 RAD17O75943 681 aa24.29■■□□□ 1.48
PDLIM2-221ENST00000622702 CAVIN4Q5BKX8 364 aa24.29■■□□□ 1.48
PDLIM2-221ENST00000622702 FBXO33Q7Z6M2 555 aa24.29■■□□□ 1.48
PDLIM2-221ENST00000622702 KIF3CO14782 793 aa24.28■■□□□ 1.48
PDLIM2-221ENST00000622702 GYG1P46976 350 aa24.28■■□□□ 1.48
PDLIM2-221ENST00000622702 GORABQ5T7V8 394 aa24.28■■□□□ 1.48
PDLIM2-221ENST00000622702 CIAPIN1Q6FI81 312 aa24.28■■□□□ 1.48
PDLIM2-221ENST00000622702 ZBTB22O15209 634 aa24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 VEGFAP15692 232 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 MX1P20591 662 aa24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 HIBADHP31937 336 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 CCDC158Q5M9N0 1113 aa24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 CCDC102BQ68D86 513 aa24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 L3MBTL3Q96JM7 780 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 KCNQ5Q9NR82 932 aa24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 STAP2Q9UGK3 403 aa24.27■■□□□ 1.48
PDLIM2-221ENST00000622702 POTECB2RU33 542 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 PHKA1P46020 1223 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 BCAMP50895 628 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 TNIP1Q15025 636 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 ZNF804AQ7Z570 1209 aa24.26■■□□□ 1.47
PDLIM2-221ENST00000622702 PLEKHM2Q8IWE5 1019 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms