RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 NBPF4Q96M43 638 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 SSR1P43307 286 aaKnown RBP18.51■□□□□ 0.55
GABRB3-215ENST00000622697 RAB34Q9BZG1 259 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 TMEM63CQ9P1W3 806 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 KCNQ3O43525 872 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
GABRB3-215ENST00000622697 CCDC178Q5BJE1 867 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 JAG2Q9Y219 1238 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 MBD5Q9P267 1494 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
GABRB3-215ENST00000622697 HS1BP3Q53T59 392 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 NGLY1Q96IV0 654 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
GABRB3-215ENST00000622697 SPTY2D1Q68D10 685 aaPredicted RBP18.5■□□□□ 0.55
GABRB3-215ENST00000622697 CALML4Q96GE6 196 aa18.5■□□□□ 0.55
GABRB3-215ENST00000622697 ZFP91Q96JP5 570 aaPredicted RBP18.5■□□□□ 0.55
GABRB3-215ENST00000622697 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
GABRB3-215ENST00000622697 ANKRD18AQ8IVF6 992 aa18.5■□□□□ 0.55
GABRB3-215ENST00000622697 CRNKL1Q9BZJ0 848 aaKnown RBP18.5■□□□□ 0.55
GABRB3-215ENST00000622697 USO1O60763 962 aaKnown RBP18.5■□□□□ 0.55
GABRB3-215ENST00000622697 KAT6BQ8WYB5 2073 aa18.5■□□□□ 0.55
GABRB3-215ENST00000622697 RAD50Q92878 1312 aa18.5■□□□□ 0.55
GABRB3-215ENST00000622697 KDM5AP29375 1690 aaKnown RBP18.5■□□□□ 0.55
GABRB3-215ENST00000622697 CNNM2Q9H8M5 875 aa18.5■□□□□ 0.55
GABRB3-215ENST00000622697 TRPM2O94759 1503 aa18.5■□□□□ 0.55
GABRB3-215ENST00000622697 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
GABRB3-215ENST00000622697 JADE2Q9NQC1 790 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 IGSF3O75054 1194 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 CCDC40Q4G0X9 1142 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 NBPF5PQ86XG9 351 aaPredicted RBP18.49■□□□□ 0.55
GABRB3-215ENST00000622697 ZMYND15Q9H091 742 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 TCERG1LQ5VWI1 586 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 CDC37L1Q7L3B6 337 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
GABRB3-215ENST00000622697 HEATR3Q7Z4Q2 680 aa18.49■□□□□ 0.55
GABRB3-215ENST00000622697 CCDC191Q8NCU4 936 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
GABRB3-215ENST00000622697 METTL22Q9BUU2 404 aaPredicted RBP18.48■□□□□ 0.55
GABRB3-215ENST00000622697 IL2RBP14784 551 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 STAT6P42226 847 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 PPP1R12BO60237 982 aaPredicted RBP18.48■□□□□ 0.55
GABRB3-215ENST00000622697 JAK2O60674 1132 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 BAG3O95817 575 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 PAFAH1B1P43034 410 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 MAP9Q49MG5 647 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 USP44Q9H0E7 712 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 TSPY3P0CV98 308 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 TSPY8P0CW00 308 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 TRIM21P19474 475 aaKnown RBP18.48■□□□□ 0.55
GABRB3-215ENST00000622697 ZNF445P59923 1031 aa18.48■□□□□ 0.55
GABRB3-215ENST00000622697 MYO1BO43795 1136 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 HSPA4P34932 840 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 ATP10AO60312 1499 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 GOLGA6L9A6NEM1 432 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
GABRB3-215ENST00000622697 BMS1Q14692 1282 aaKnown RBP18.47■□□□□ 0.55
GABRB3-215ENST00000622697 TMOD2Q9NZR1 351 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 ERVK-7P63135 1459 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 KARSQ15046 597 aaKnown RBP18.47■□□□□ 0.55
GABRB3-215ENST00000622697 SYT10Q6XYQ8 523 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 DRC1Q96MC2 740 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 B4E1Z4 1266 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 TMTC2Q8N394 836 aa18.47■□□□□ 0.55
GABRB3-215ENST00000622697 A1BGP04217 495 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 CCDC113Q9H0I3 377 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 F8W031 263 aaPredicted RBP18.46■□□□□ 0.55
GABRB3-215ENST00000622697 FGFR1OPO95684 399 aaKnown RBP18.46■□□□□ 0.55
GABRB3-215ENST00000622697 EIF4A1P60842 406 aaKnown RBP18.46■□□□□ 0.55
GABRB3-215ENST00000622697 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 MAGEB6P1A0A0J9YX57 407 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 BCCIPQ9P287 314 aaKnown RBP eCLIP18.46■□□□□ 0.55
GABRB3-215ENST00000622697 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 LMAN1P49257 510 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 AMPD3Q01432 767 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 PLIN2Q99541 437 aa18.46■□□□□ 0.55
GABRB3-215ENST00000622697 TBX22Q9Y458 520 aa18.46■□□□□ 0.54
GABRB3-215ENST00000622697 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
GABRB3-215ENST00000622697 EXOC1Q9NV70 894 aa18.45■□□□□ 0.54
GABRB3-215ENST00000622697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.45■□□□□ 0.54
GABRB3-215ENST00000622697 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
GABRB3-215ENST00000622697 PTH1RQ03431 593 aa18.45■□□□□ 0.54
GABRB3-215ENST00000622697 HELLSQ9NRZ9 838 aa18.45■□□□□ 0.54
GABRB3-215ENST00000622697 EYA2O00167 538 aa18.45■□□□□ 0.54
GABRB3-215ENST00000622697 MBD4O95243 580 aa18.45■□□□□ 0.54
GABRB3-215ENST00000622697 SEPT7Q16181 437 aaKnown RBP18.44■□□□□ 0.54
GABRB3-215ENST00000622697 GAS2L3Q86XJ1 694 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 LZTFL1Q9NQ48 299 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 TMCO5BA8MYB1 307 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 LDHCP07864 332 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 GOPCQ9HD26 462 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 ANKRD62A6NC57 917 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 SLU7O95391 586 aaKnown RBP18.44■□□□□ 0.54
GABRB3-215ENST00000622697 BRD1O95696 1058 aa18.44■□□□□ 0.54
GABRB3-215ENST00000622697 MCM7P33993 719 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms