RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 SLIT3O75094 1523 aa15.19■□□□□ 0.02
CHD1L-210ENST00000622533 COL15A1P39059 1388 aa15.19■□□□□ 0.02
CHD1L-210ENST00000622533 IGKV5-2P06315 115 aa15.19■□□□□ 0.02
CHD1L-210ENST00000622533 GCKRQ14397 625 aa15.19■□□□□ 0.02
CHD1L-210ENST00000622533 SMARCE1Q969G3 411 aa15.19■□□□□ 0.02
CHD1L-210ENST00000622533 TRIM66O15016 1216 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 FAM193AP78312 1265 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 AIMP1Q12904 312 aaKnown RBP15.18■□□□□ 0.02
CHD1L-210ENST00000622533 PDIA6Q15084 440 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 ANKRD24Q8TF21 1146 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 METTL22Q9BUU2 404 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-210ENST00000622533 EPC1Q9H2F5 836 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 RSPH14Q9UHP6 348 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 LCMT1Q9UIC8 334 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 GCP02774 474 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 HSP90B1P14625 803 aaKnown RBP15.18■□□□□ 0.02
CHD1L-210ENST00000622533 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-210ENST00000622533 CREBRFQ8IUR6 639 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 BRF1Q92994 677 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 PPP1R13BQ96KQ4 1090 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 L2HGDHQ9H9P8 463 aa15.18■□□□□ 0.02
CHD1L-210ENST00000622533 DHX40Q8IX18 779 aaKnown RBP15.17■□□□□ 0.02
CHD1L-210ENST00000622533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.17■□□□□ 0.027e-9■■□□□ 13.6
CHD1L-210ENST00000622533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-210ENST00000622533 SETD1BQ9UPS6 1966 aaKnown RBP15.17■□□□□ 0.02
CHD1L-210ENST00000622533 FOSBP53539 338 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 IRX3P78415 501 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-210ENST00000622533 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 TNNI3KQ59H18 835 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 ESCO1Q5FWF5 840 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 TEX35Q5T0J7 233 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 TMCO3Q6UWJ1 677 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 C10orf67Q8IYJ2 551 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 TAF6LQ9Y6J9 622 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 FPGT-TNNI3KV9GXZ4 949 aa15.17■□□□□ 0.02
CHD1L-210ENST00000622533 GYS2P54840 703 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 Q6ZUG5 572 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 AOPEPQ8N6M6 819 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 FTOQ9C0B1 505 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHD1L-210ENST00000622533 JAK2O60674 1132 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 STX1AQ16623 288 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 CCDC93Q567U6 631 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 PRAMEF22A3QJZ6 481 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 PFKFB2O60825 505 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 ZRANB2O95218 330 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHD1L-210ENST00000622533 ZNF790Q6PG37 636 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 NBPF11Q86T75 865 aa15.16■□□□□ 0.02
CHD1L-210ENST00000622533 HOMER1Q86YM7 354 aa15.15■□□□□ 0.02
CHD1L-210ENST00000622533 CCDC34Q96HJ3 373 aa15.15■□□□□ 0.02
CHD1L-210ENST00000622533 ZNF396Q96N95 335 aaPredicted RBP15.15■□□□□ 0.02
CHD1L-210ENST00000622533 HAUS7Q99871 368 aa15.15■□□□□ 0.02
CHD1L-210ENST00000622533 UBXN4Q92575 508 aa15.15■□□□□ 0.02
CHD1L-210ENST00000622533 ORC3Q9UBD5 711 aaPredicted RBP15.15■□□□□ 0.02
CHD1L-210ENST00000622533 DBNLQ9UJU6 430 aaKnown RBP15.15■□□□□ 0.02
CHD1L-210ENST00000622533 SH3TC1Q8TE82 1336 aa15.15■□□□□ 0.02
CHD1L-210ENST00000622533 CCDC191Q8NCU4 936 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 MYD88Q99836 296 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 GOLPH3LQ9H4A5 285 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 DNAI1Q9UI46 699 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 RCOR1Q9UKL0 485 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 KIF2AO00139 706 aaPredicted RBP15.14■□□□□ 0.01
CHD1L-210ENST00000622533 TPM4P67936 248 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 RABL6Q3YEC7 729 aaPredicted RBP15.14■□□□□ 0.01
CHD1L-210ENST00000622533 CCDC73Q6ZRK6 1079 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
CHD1L-210ENST00000622533 TXLNBQ8N3L3 684 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 XAGE3Q8WTP9 111 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 RASSF4Q9H2L5 321 aa15.14■□□□□ 0.01
CHD1L-210ENST00000622533 SASH3O75995 380 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 OAS2P29728 719 aaKnown RBP15.13■□□□□ 0.01
CHD1L-210ENST00000622533 ARMCX5Q6P1M9 558 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 TMC6Q7Z403 805 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 ZNF609O15014 1411 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 RFX5P48382 616 aaPredicted RBP15.13■□□□□ 0.01
CHD1L-210ENST00000622533 PTPN12Q05209 780 aaKnown RBP15.13■□□□□ 0.01
CHD1L-210ENST00000622533 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 DHX32Q7L7V1 743 aaKnown RBP15.13■□□□□ 0.01
CHD1L-210ENST00000622533 SLC52A2Q9HAB3 445 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 SMC2O95347 1197 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 CYP21A2P08686 494 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 SCRN1Q12765 414 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 TFCP2Q12800 502 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 ZSCAN26Q16670 478 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 COPS6Q7L5N1 327 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 KLHDC4Q8TBB5 520 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 ANO10Q9NW15 660 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 PLEKHG2Q9H7P9 1386 aa15.13■□□□□ 0.01
CHD1L-210ENST00000622533 MYO1CO00159 1063 aa15.12■□□□□ 0.01
CHD1L-210ENST00000622533 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
CHD1L-210ENST00000622533 KBTBD3Q8NAB2 608 aa15.12■□□□□ 0.01
CHD1L-210ENST00000622533 DSCC1Q9BVC3 393 aa15.12■□□□□ 0.01
CHD1L-210ENST00000622533 NAT10Q9H0A0 1025 aaKnown RBP15.12■□□□□ 0.01
CHD1L-210ENST00000622533 ARGLU1Q9NWB6 273 aaPredicted RBP15.12■□□□□ 0.01
CHD1L-210ENST00000622533 PALLDQ8WX93 1383 aa15.12■□□□□ 0.01
CHD1L-210ENST00000622533 EPHA10Q5JZY3 1008 aa15.12■□□□□ 0.01
CHD1L-210ENST00000622533 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 289.6 ms