RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 LCE2BO14633 110 aa7.74□□□□□ -1.17
CPNE3-213ENST00000622183 ITPKAP23677 461 aa7.74□□□□□ -1.17
CPNE3-213ENST00000622183 GRIA4P48058 902 aa7.74□□□□□ -1.17
CPNE3-213ENST00000622183 MLLT1Q03111 559 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-213ENST00000622183 GNL2Q13823 731 aaKnown RBP7.74□□□□□ -1.17
CPNE3-213ENST00000622183 NXPE3Q969Y0 559 aa7.74□□□□□ -1.17
CPNE3-213ENST00000622183 PBX4Q9BYU1 374 aa7.74□□□□□ -1.17
CPNE3-213ENST00000622183 CAPN10Q9HC96 672 aa7.74□□□□□ -1.17
CPNE3-213ENST00000622183 AKAP2Q9Y2D5 859 aa7.74□□□□□ -1.17
CPNE3-213ENST00000622183 J3QW42 95 aa7.73□□□□□ -1.17
CPNE3-213ENST00000622183 PDE2AO00408 941 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-213ENST00000622183 TRPA1O75762 1119 aa7.73□□□□□ -1.17
CPNE3-213ENST00000622183 MAP3K10Q02779 954 aa7.73□□□□□ -1.17
CPNE3-213ENST00000622183 CCDC85BQ15834 202 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-213ENST00000622183 Q6ZNB5 142 aa7.73□□□□□ -1.17
CPNE3-213ENST00000622183 HHIPQ96QV1 700 aa7.73□□□□□ -1.17
CPNE3-213ENST00000622183 UBE2OQ9C0C9 1292 aaKnown RBP7.73□□□□□ -1.17
CPNE3-213ENST00000622183 GHRHP01286 108 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 MX2P20592 715 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 TNNI2P48788 182 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 PCBP4P57723 403 aaKnown RBP7.72□□□□□ -1.17
CPNE3-213ENST00000622183 PWP1Q13610 501 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 SV2BQ7L1I2 683 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 TNFRSF25Q93038 417 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 RSRP1Q9BUV0 290 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 CEP44Q9C0F1 390 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 RBSNQ9H1K0 784 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 RASSF4Q9H2L5 321 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 IGFLR1Q9H665 355 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 COPRSQ9NQ92 184 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 KBTBD4Q9NVX7 518 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 INPP5FQ9Y2H2 1132 aa7.72□□□□□ -1.17
CPNE3-213ENST00000622183 A0A096LPE4 126 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 A0A1W2PPZ6 126 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 METTL12A8MUP2 240 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 ARAFP10398 606 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 RLBP1P12271 317 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 EIF2AK2P19525 551 aaKnown RBP7.71□□□□□ -1.18
CPNE3-213ENST00000622183 ADH6P28332 368 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 ATP11AP98196 1134 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 TBC1D8BQ0IIM8 1120 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 GAS6Q14393 721 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 RPS26P11Q5JNZ5 115 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-213ENST00000622183 HFE2Q6ZVN8 426 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 GMLQ99445 158 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 SLC6A14Q9UN76 642 aa7.71□□□□□ -1.18
CPNE3-213ENST00000622183 ADARB2-AS1A8MUL3 147 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 FBXO24O75426 580 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 GJA8P48165 433 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 FAM35AQ86V20 835 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 UBXN4Q92575 508 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 POP1Q99575 1024 aaKnown RBP7.7□□□□□ -1.18
CPNE3-213ENST00000622183 MDFIQ99750 246 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 ZNF576Q9H609 170 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 KLF15Q9UIH9 416 aa7.7□□□□□ -1.18
CPNE3-213ENST00000622183 LOC105371045A0A1W2PR82 267 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 SMNDC1O75940 238 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPNE3-213ENST00000622183 ADH7P40394 386 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 TPTE2Q6XPS3 522 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 NPAS3Q8IXF0 933 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 ASAP3Q8TDY4 903 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 PLD4Q96BZ4 506 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 TMEM74Q96NL1 305 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 TRIM56Q9BRZ2 755 aaKnown RBP7.69□□□□□ -1.18
CPNE3-213ENST00000622183 TANGO6Q9C0B7 1094 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 NXF1Q9UBU9 619 aaKnown RBP7.69□□□□□ -1.18
CPNE3-213ENST00000622183 NAGPAQ9UK23 515 aa7.69□□□□□ -1.18
CPNE3-213ENST00000622183 NSFL1CQ9UNZ2 370 aaKnown RBP7.69□□□□□ -1.18
CPNE3-213ENST00000622183 CPB1P15086 417 aa7.68□□□□□ -1.18
CPNE3-213ENST00000622183 MAP2K3P46734 347 aa7.68□□□□□ -1.18
CPNE3-213ENST00000622183 RELL1Q8IUW5 271 aa7.68□□□□□ -1.18
CPNE3-213ENST00000622183 BSNDQ8WZ55 320 aa7.68□□□□□ -1.18
CPNE3-213ENST00000622183 PPP1R1BQ9UD71 204 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-213ENST00000622183 PRKAG2Q9UGJ0 569 aa7.68□□□□□ -1.18
CPNE3-213ENST00000622183 ENC1O14682 589 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 CELA3AP09093 270 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 ARID5AQ03989 594 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 PAK2Q13177 524 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 PERM1Q5SV97 790 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 CEP135Q66GS9 1140 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 PHC3Q8NDX5 983 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 NECAB3Q96P71 396 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-213ENST00000622183 MUC3BQ9H195 1237 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 SEC31BQ9NQW1 1179 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 MBIPQ9NS73 344 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 ADAMTS1Q9UHI8 967 aa7.67□□□□□ -1.18
CPNE3-213ENST00000622183 H3BM21 787 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 VSIG8P0DPA2 414 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 PTPRAP18433 802 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 GBP2P32456 591 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-213ENST00000622183 LIG3P49916 1009 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 FAAP100Q0VG06 881 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 ELMSAN1Q6PJG2 1045 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 FCHSD1Q86WN1 690 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 VPS37DQ86XT2 251 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 MICALL1Q8N3F8 863 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 GPRASP2Q96D09 838 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 RHOVQ96L33 236 aa7.66□□□□□ -1.18
CPNE3-213ENST00000622183 SPON2Q9BUD6 331 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms