RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 XDHP47989 1333 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 DUOX1Q9NRD9 1551 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 WTIPA6NIX2 430 aaPredicted RBP12.96□□□□□ -0.33
CPNE3-212ENST00000621783 H0YIN7 160 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
CPNE3-212ENST00000621783 CHRNA5P30532 468 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 KCNJ4P48050 445 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 SCARF1Q14162 830 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 CCDC102BQ68D86 513 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 CASC1Q6TDU7 716 aa12.96□□□□□ -0.33
CPNE3-212ENST00000621783 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.33
CPNE3-212ENST00000621783 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
CPNE3-212ENST00000621783 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
CPNE3-212ENST00000621783 AKAP11Q9UKA4 1901 aa12.96□□□□□ -0.34
CPNE3-212ENST00000621783 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 UQCRFS1P1P0C7P4 283 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 CHMLP26374 656 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 KLRK1P26718 216 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 POLD1P28340 1107 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 ALDH1B1P30837 517 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 MCAMP43121 646 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
CPNE3-212ENST00000621783 GPSM2P81274 684 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.34
CPNE3-212ENST00000621783 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 PAG1Q9NWQ8 432 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 ATP6V0A2Q9Y487 856 aa12.95□□□□□ -0.34
CPNE3-212ENST00000621783 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
CPNE3-212ENST00000621783 COL1A1P02452 1464 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-212ENST00000621783 GOLIM4O00461 696 aa12.94□□□□□ -0.34
CPNE3-212ENST00000621783 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
CPNE3-212ENST00000621783 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
CPNE3-212ENST00000621783 LEMD3Q9Y2U8 911 aa12.94□□□□□ -0.34
CPNE3-212ENST00000621783 SLX4Q8IY92 1834 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 DOCK2Q92608 1830 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 UFL1O94874 794 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 ZAP70P43403 619 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 GYG1P46976 350 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 BCAMP50895 628 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
CPNE3-212ENST00000621783 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 KBTBD3Q8NAB2 608 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 ESYT1Q9BSJ8 1104 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 PODXL2Q9NZ53 605 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 MYH13Q9UKX3 1938 aa12.93□□□□□ -0.34
CPNE3-212ENST00000621783 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
CPNE3-212ENST00000621783 RASGRF1Q13972 1273 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 CNKSR1Q969H4 720 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 ANTXR1Q9H6X2 564 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
CPNE3-212ENST00000621783 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 GGA1Q9UJY5 639 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
CPNE3-212ENST00000621783 RBM19Q9Y4C8 960 aaKnown RBP12.92□□□□□ -0.34
CPNE3-212ENST00000621783 MYH7P12883 1935 aa12.92□□□□□ -0.34
CPNE3-212ENST00000621783 HIP1O00291 1037 aa12.91□□□□□ -0.34
CPNE3-212ENST00000621783 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
CPNE3-212ENST00000621783 PTGER2P43116 358 aa12.91□□□□□ -0.34
CPNE3-212ENST00000621783 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
CPNE3-212ENST00000621783 C15orf52Q6ZUT6 534 aaKnown RBP12.91□□□□□ -0.34
CPNE3-212ENST00000621783 FBXO33Q7Z6M2 555 aa12.91□□□□□ -0.34
CPNE3-212ENST00000621783 SPATA5Q8NB90 893 aa12.91□□□□□ -0.34
CPNE3-212ENST00000621783 FAM84BQ96KN1 310 aaPredicted RBP12.91□□□□□ -0.34
CPNE3-212ENST00000621783 GPR101Q96P66 508 aaPredicted RBP12.91□□□□□ -0.34
CPNE3-212ENST00000621783 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
CPNE3-212ENST00000621783 MED23Q9ULK4 1368 aa12.91□□□□□ -0.34
CPNE3-212ENST00000621783 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
CPNE3-212ENST00000621783 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
CPNE3-212ENST00000621783 CYP2E1P05181 493 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-212ENST00000621783 DPEP1P16444 411 aa12.9□□□□□ -0.34
CPNE3-212ENST00000621783 HIBADHP31937 336 aaKnown RBP12.9□□□□□ -0.34
CPNE3-212ENST00000621783 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
CPNE3-212ENST00000621783 NMIQ13287 307 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-212ENST00000621783 TXNRD3Q86VQ6 643 aa12.9□□□□□ -0.34
CPNE3-212ENST00000621783 VPS37DQ86XT2 251 aa12.9□□□□□ -0.34
CPNE3-212ENST00000621783 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
CPNE3-212ENST00000621783 IL25Q9H293 177 aa12.9□□□□□ -0.34
CPNE3-212ENST00000621783 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
CPNE3-212ENST00000621783 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-212ENST00000621783 BRCA1P38398 1863 aaKnown RBP12.9□□□□□ -0.34
CPNE3-212ENST00000621783 RAD50Q92878 1312 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 SEMA3EO15041 775 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 SGSM2O43147 1006 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 TTF1Q15361 905 aaPredicted RBP12.89□□□□□ -0.35
CPNE3-212ENST00000621783 CWC27Q6UX04 472 aaKnown RBP12.89□□□□□ -0.35
CPNE3-212ENST00000621783 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 MPNDQ8N594 471 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 RUFY2Q8WXA3 655 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
CPNE3-212ENST00000621783 POLLQ9UGP5 575 aa12.89□□□□□ -0.35
CPNE3-212ENST00000621783 MYO5AQ9Y4I1 1855 aaKnown RBP12.89□□□□□ -0.35
CPNE3-212ENST00000621783 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms