RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 LRRC24Q50LG9 513 aa15.05■□□□□ -0
COL8A1-208ENST00000621757 EAPPQ56P03 285 aaPredicted RBP15.05■□□□□ -0
COL8A1-208ENST00000621757 ITPRIPQ8IWB1 547 aa15.05■□□□□ -0
COL8A1-208ENST00000621757 GPRC5DQ9NZD1 345 aa15.05■□□□□ -0
COL8A1-208ENST00000621757 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
COL8A1-208ENST00000621757 RIPOR2Q9Y4F9 1068 aa15.05■□□□□ -0
COL8A1-208ENST00000621757 MROH5Q6ZUA9 1318 aa15.04■□□□□ -0
COL8A1-208ENST00000621757 COL13A1Q5TAT6 717 aaPredicted RBP15.04■□□□□ -0
COL8A1-208ENST00000621757 ZNF609O15014 1411 aa15.03■□□□□ -0
COL8A1-208ENST00000621757 SHTN1A0MZ66 631 aa15.03■□□□□ -0
COL8A1-208ENST00000621757 PTPN12Q05209 780 aaKnown RBP15.03■□□□□ -0
COL8A1-208ENST00000621757 METTL24Q5JXM2 366 aa15.03■□□□□ -0
COL8A1-208ENST00000621757 C15orf52Q6ZUT6 534 aaKnown RBP15.03■□□□□ -0
COL8A1-208ENST00000621757 PODNQ7Z5L7 613 aa15.03■□□□□ -0
COL8A1-208ENST00000621757 LDHDQ86WU2 507 aa15.03■□□□□ -0
COL8A1-208ENST00000621757 PANK1Q8TE04 598 aa15.03■□□□□ -0
COL8A1-208ENST00000621757 COA1Q9GZY4 146 aa15.03■□□□□ -0
COL8A1-208ENST00000621757 EYA2O00167 538 aa15.02■□□□□ -0
COL8A1-208ENST00000621757 GNAI2P04899 355 aa15.02■□□□□ -0
COL8A1-208ENST00000621757 PNMA8AQ86V59 439 aaPredicted RBP15.02■□□□□ -0
COL8A1-208ENST00000621757 MICALL2Q8IY33 904 aa15.02■□□□□ -0
COL8A1-208ENST00000621757 VGLL2Q8N8G2 317 aa15.02■□□□□ -0
COL8A1-208ENST00000621757 SIL1Q9H173 461 aa15.02■□□□□ -0
COL8A1-208ENST00000621757 SRGAP3O43295 1099 aa15.01□□□□□ -0.01
COL8A1-208ENST00000621757 VIL1P09327 827 aaKnown RBP15.01□□□□□ -0.01
COL8A1-208ENST00000621757 RPS12P25398 132 aaKnown RBP15.01□□□□□ -0.01
COL8A1-208ENST00000621757 MTX1Q13505 466 aa15.01□□□□□ -0.01
COL8A1-208ENST00000621757 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
COL8A1-208ENST00000621757 ADARB2Q9NS39 739 aaKnown RBP15.01□□□□□ -0.01
COL8A1-208ENST00000621757 PA2G4Q9UQ80 394 aaKnown RBP15.01□□□□□ -0.01
COL8A1-208ENST00000621757 USP17L3A6NCW0 530 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 USP17L4A6NCW7 530 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 UBE4AQ14139 1066 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 RSBN1LQ6PCB5 846 aaPredicted RBP15□□□□□ -0.01
COL8A1-208ENST00000621757 USP50Q70EL3 339 aaPredicted RBP15□□□□□ -0.01
COL8A1-208ENST00000621757 USP17L1Q7RTZ2 530 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 ATG9AQ7Z3C6 839 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 ZNF804AQ7Z570 1209 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 DPF2Q92785 391 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 FBXW7Q969H0 707 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 CD209Q9NNX6 404 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 CNOT7Q9UIV1 285 aaKnown RBP15□□□□□ -0.01
COL8A1-208ENST00000621757 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
COL8A1-208ENST00000621757 ZBTB7BO15156 539 aaPredicted RBP14.99□□□□□ -0.01
COL8A1-208ENST00000621757 CIAO1O76071 339 aa14.99□□□□□ -0.01
COL8A1-208ENST00000621757 PDE8BO95263 885 aa14.99□□□□□ -0.01
COL8A1-208ENST00000621757 DACT2Q5SW24 774 aa14.99□□□□□ -0.01
COL8A1-208ENST00000621757 TRPM4Q8TD43 1214 aa14.99□□□□□ -0.01
COL8A1-208ENST00000621757 MXD3Q9BW11 206 aa14.99□□□□□ -0.01
COL8A1-208ENST00000621757 COPRSQ9NQ92 184 aa14.99□□□□□ -0.01
COL8A1-208ENST00000621757 ARAP2Q8WZ64 1704 aa14.99□□□□□ -0.01
COL8A1-208ENST00000621757 PNMA6EA0A0J9YXQ4 647 aa14.98□□□□□ -0.01
COL8A1-208ENST00000621757 MS4A1P11836 297 aa14.98□□□□□ -0.01
COL8A1-208ENST00000621757 IL1R1P14778 569 aa14.98□□□□□ -0.01
COL8A1-208ENST00000621757 GYG1P46976 350 aa14.98□□□□□ -0.01
COL8A1-208ENST00000621757 PUM3Q15397 648 aaKnown RBP14.98□□□□□ -0.01
COL8A1-208ENST00000621757 STRIP1Q5VSL9 837 aa14.98□□□□□ -0.01
COL8A1-208ENST00000621757 MAP1SQ66K74 1059 aaPredicted RBP14.98□□□□□ -0.01
COL8A1-208ENST00000621757 AGBL3Q8NEM8 1001 aa14.98□□□□□ -0.01
COL8A1-208ENST00000621757 FBXO3Q9UK99 471 aa14.98□□□□□ -0.01
COL8A1-208ENST00000621757 H7C1D1 291 aa14.97□□□□□ -0.01
COL8A1-208ENST00000621757 EGFRP00533 1210 aa14.97□□□□□ -0.01
COL8A1-208ENST00000621757 IL15P40933 162 aaPredicted RBP14.97□□□□□ -0.01
COL8A1-208ENST00000621757 GTF2IP78347 998 aa14.97□□□□□ -0.01
COL8A1-208ENST00000621757 MVPQ14764 893 aaKnown RBP14.97□□□□□ -0.01
COL8A1-208ENST00000621757 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
COL8A1-208ENST00000621757 GMLQ99445 158 aa14.97□□□□□ -0.01
COL8A1-208ENST00000621757 MYO3BQ8WXR4 1341 aa14.96□□□□□ -0.01
COL8A1-208ENST00000621757 FGFR2P21802 821 aa14.96□□□□□ -0.01
COL8A1-208ENST00000621757 HIRAP54198 1017 aaPredicted RBP14.96□□□□□ -0.01
COL8A1-208ENST00000621757 TBC1D10BQ4KMP7 808 aaPredicted RBP14.96□□□□□ -0.01
COL8A1-208ENST00000621757 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.01
COL8A1-208ENST00000621757 TTLL5Q6EMB2 1281 aa14.96□□□□□ -0.01
COL8A1-208ENST00000621757 FAM84BQ96KN1 310 aaPredicted RBP14.96□□□□□ -0.01
COL8A1-208ENST00000621757 COG6Q9Y2V7 657 aa14.96□□□□□ -0.01
COL8A1-208ENST00000621757 MYH13Q9UKX3 1938 aa14.96□□□□□ -0.02
COL8A1-208ENST00000621757 USP17L8P0C7I0 530 aa14.95□□□□□ -0.02
COL8A1-208ENST00000621757 HSPA1AP0DMV8 641 aaKnown RBP14.95□□□□□ -0.02
COL8A1-208ENST00000621757 HSPA1BP0DMV9 641 aaKnown RBP14.95□□□□□ -0.02
COL8A1-208ENST00000621757 SLC5A1P13866 664 aa14.95□□□□□ -0.02
COL8A1-208ENST00000621757 HIBADHP31937 336 aaKnown RBP14.95□□□□□ -0.02
COL8A1-208ENST00000621757 ZNF280AP59817 542 aaPredicted RBP14.95□□□□□ -0.02
COL8A1-208ENST00000621757 KIF4BQ2VIQ3 1234 aa14.95□□□□□ -0.02
COL8A1-208ENST00000621757 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.95□□□□□ -0.02
COL8A1-208ENST00000621757 CEP126Q9P2H0 1117 aa14.95□□□□□ -0.02
COL8A1-208ENST00000621757 JAG2Q9Y219 1238 aa14.95□□□□□ -0.02
COL8A1-208ENST00000621757 PASKQ96RG2 1323 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 ITGBL1O95965 494 aaPredicted RBP14.94□□□□□ -0.02
COL8A1-208ENST00000621757 IFIT1P09914 478 aaKnown RBP14.94□□□□□ -0.02
COL8A1-208ENST00000621757 POLA2Q14181 598 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 ATP2B3Q16720 1220 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 CAVIN4Q5BKX8 364 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 RBM26Q5T8P6 1007 aaKnown RBP14.94□□□□□ -0.02
COL8A1-208ENST00000621757 VPS37DQ86XT2 251 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 CNTROBQ8N137 903 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 CERS5Q8N5B7 392 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 TDRD7Q8NHU6 1098 aaKnown RBP14.94□□□□□ -0.02
COL8A1-208ENST00000621757 LPIN2Q92539 896 aa14.94□□□□□ -0.02
COL8A1-208ENST00000621757 DDX19BQ9UMR2 479 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms