RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 MED23Q9ULK4 1368 aa20.13■□□□□ 0.81
SNHG28-203ENST00000621242 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
SNHG28-203ENST00000621242 NF2P35240 595 aa20.13■□□□□ 0.81
SNHG28-203ENST00000621242 OGFOD1Q8N543 542 aa20.13■□□□□ 0.81
SNHG28-203ENST00000621242 FBXW7Q969H0 707 aa20.13■□□□□ 0.81
SNHG28-203ENST00000621242 R3HDMLQ9H3Y0 253 aa20.13■□□□□ 0.81
SNHG28-203ENST00000621242 FKTNO75072 461 aa20.12■□□□□ 0.81
SNHG28-203ENST00000621242 PTPN12Q05209 780 aaKnown RBP20.12■□□□□ 0.81
SNHG28-203ENST00000621242 SREBF2Q12772 1141 aa20.12■□□□□ 0.81
SNHG28-203ENST00000621242 PRKG1Q13976 671 aa20.12■□□□□ 0.81
SNHG28-203ENST00000621242 SASH1O94885 1247 aa20.11■□□□□ 0.81
SNHG28-203ENST00000621242 WDR43Q15061 677 aaKnown RBP eCLIP20.11■□□□□ 0.81
SNHG28-203ENST00000621242 CDC5LQ99459 802 aaKnown RBP20.11■□□□□ 0.81
SNHG28-203ENST00000621242 METTL22Q9BUU2 404 aaPredicted RBP20.11■□□□□ 0.81
SNHG28-203ENST00000621242 MINPP1Q9UNW1 487 aa20.11■□□□□ 0.81
SNHG28-203ENST00000621242 ADAMTS8Q9UP79 889 aa20.11■□□□□ 0.81
SNHG28-203ENST00000621242 MKI67P46013 3256 aaKnown RBP20.1■□□□□ 0.81
SNHG28-203ENST00000621242 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
SNHG28-203ENST00000621242 CCT4P50991 539 aaKnown RBP20.1■□□□□ 0.81
SNHG28-203ENST00000621242 STRIP1Q5VSL9 837 aa20.1■□□□□ 0.81
SNHG28-203ENST00000621242 CFHR5Q9BXR6 569 aa20.1■□□□□ 0.81
SNHG28-203ENST00000621242 BSDC1Q9NW68 430 aaPredicted RBP20.1■□□□□ 0.81
SNHG28-203ENST00000621242 CENPFP49454 3210 aa20.1■□□□□ 0.81
SNHG28-203ENST00000621242 HTTP42858 3142 aa20.09■□□□□ 0.81
SNHG28-203ENST00000621242 MYO3BQ8WXR4 1341 aa20.09■□□□□ 0.81
SNHG28-203ENST00000621242 MYBBP1AQ9BQG0 1328 aaKnown RBP20.09■□□□□ 0.81
SNHG28-203ENST00000621242 CTSWP56202 376 aa20.09■□□□□ 0.81
SNHG28-203ENST00000621242 ARMC9Q7Z3E5 817 aa20.09■□□□□ 0.81
SNHG28-203ENST00000621242 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
SNHG28-203ENST00000621242 TTLL11Q8NHH1 800 aa20.09■□□□□ 0.81
SNHG28-203ENST00000621242 COA1Q9GZY4 146 aa20.08■□□□□ 0.81
SNHG28-203ENST00000621242 GREM2Q9H772 168 aa20.08■□□□□ 0.81
SNHG28-203ENST00000621242 KIAA0100Q14667 2235 aaKnown RBP20.08■□□□□ 0.8
SNHG28-203ENST00000621242 DDX58O95786 925 aaKnown RBP20.07■□□□□ 0.8
SNHG28-203ENST00000621242 LDLRAD1Q5T700 205 aa20.07■□□□□ 0.8
SNHG28-203ENST00000621242 SPRYD7Q5W111 196 aa20.07■□□□□ 0.8
SNHG28-203ENST00000621242 ANGEL1Q9UNK9 670 aaKnown RBP20.07■□□□□ 0.8
SNHG28-203ENST00000621242 FZD1Q9UP38 647 aa20.07■□□□□ 0.8
SNHG28-203ENST00000621242 MAP3K2Q9Y2U5 619 aa20.07■□□□□ 0.8
SNHG28-203ENST00000621242 TTLL5Q6EMB2 1281 aa20.06■□□□□ 0.8
SNHG28-203ENST00000621242 APOBEC3FQ8IUX4 373 aaKnown RBP20.06■□□□□ 0.8
SNHG28-203ENST00000621242 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
SNHG28-203ENST00000621242 C8orf58Q8NAV2 365 aa20.06■□□□□ 0.8
SNHG28-203ENST00000621242 IFT57Q9NWB7 429 aa20.06■□□□□ 0.8
SNHG28-203ENST00000621242 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
SNHG28-203ENST00000621242 ALDH1A1P00352 501 aa20.05■□□□□ 0.8
SNHG28-203ENST00000621242 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
SNHG28-203ENST00000621242 MMP14P50281 582 aa20.05■□□□□ 0.8
SNHG28-203ENST00000621242 GNAI1P63096 354 aa20.05■□□□□ 0.8
SNHG28-203ENST00000621242 GCC1Q96CN9 775 aa20.05■□□□□ 0.8
SNHG28-203ENST00000621242 ECM29Q5VYK3 1845 aa20.04■□□□□ 0.8
SNHG28-203ENST00000621242 ZBED3Q96IU2 234 aaPredicted RBP20.04■□□□□ 0.8
SNHG28-203ENST00000621242 LEMD3Q9Y2U8 911 aa20.04■□□□□ 0.8
SNHG28-203ENST00000621242 TRIM17Q9Y577 477 aa20.04■□□□□ 0.8
SNHG28-203ENST00000621242 LAMB1P07942 1786 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 KLRK1P26718 216 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 GTF2IP78347 998 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 KSR2Q6VAB6 950 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 SLC10A4Q96EP9 437 aa20.03■□□□□ 0.8
SNHG28-203ENST00000621242 ZNF804BA4D1E1 1349 aa20.02■□□□□ 0.8
SNHG28-203ENST00000621242 BRCA2P51587 3418 aa20.02■□□□□ 0.8
SNHG28-203ENST00000621242 POTEFA5A3E0 1075 aa20.02■□□□□ 0.8
SNHG28-203ENST00000621242 MANSC4A6NHS7 340 aaPredicted RBP20.02■□□□□ 0.8
SNHG28-203ENST00000621242 INHBEP58166 350 aa20.02■□□□□ 0.8
SNHG28-203ENST00000621242 CWF19L2Q2TBE0 894 aaKnown RBP20.02■□□□□ 0.8
SNHG28-203ENST00000621242 OTOP1Q7RTM1 612 aa20.02■□□□□ 0.8
SNHG28-203ENST00000621242 IFNL1Q8IU54 200 aa20.02■□□□□ 0.8
SNHG28-203ENST00000621242 DEFB129Q9H1M3 183 aa20.02■□□□□ 0.8
SNHG28-203ENST00000621242 RBBP6Q7Z6E9 1792 aaKnown RBP20.01■□□□□ 0.79
SNHG28-203ENST00000621242 APAF1O14727 1248 aa20.01■□□□□ 0.79
SNHG28-203ENST00000621242 IGHMBP2P38935 993 aaKnown RBP20.01■□□□□ 0.79
SNHG28-203ENST00000621242 CLMNQ96JQ2 1002 aa20.01■□□□□ 0.79
SNHG28-203ENST00000621242 COL1A1P02452 1464 aaPredicted RBP20■□□□□ 0.79
SNHG28-203ENST00000621242 IGF2BP3O00425 579 aaKnown RBP eCLIP20■□□□□ 0.79
SNHG28-203ENST00000621242 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
SNHG28-203ENST00000621242 NEXNQ0ZGT2 675 aa20■□□□□ 0.79
SNHG28-203ENST00000621242 HABP4Q5JVS0 413 aaKnown RBP20■□□□□ 0.79
SNHG28-203ENST00000621242 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
SNHG28-203ENST00000621242 ANKRD2Q9GZV1 360 aa20■□□□□ 0.79
SNHG28-203ENST00000621242 NEURL1BA8MQ27 555 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 ZBTB48P10074 688 aaPredicted RBP19.99■□□□□ 0.79
SNHG28-203ENST00000621242 DDX10Q13206 875 aaKnown RBP19.99■□□□□ 0.79
SNHG28-203ENST00000621242 DLGAP5Q15398 846 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 MAP3K11Q16584 847 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 UBE3BQ7Z3V4 1068 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 TSPYL6Q8N831 410 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 WNK4Q96J92 1243 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 SSC5DA1L4H1 1573 aa19.99■□□□□ 0.79
SNHG28-203ENST00000621242 H7C1W4 665 aa19.98■□□□□ 0.79
SNHG28-203ENST00000621242 PPP1R12BO60237 982 aaPredicted RBP19.98■□□□□ 0.79
SNHG28-203ENST00000621242 ITGA6P23229 1130 aa19.98■□□□□ 0.79
SNHG28-203ENST00000621242 MPHOSPH8Q99549 860 aa19.98■□□□□ 0.79
SNHG28-203ENST00000621242 CD209Q9NNX6 404 aa19.98■□□□□ 0.79
SNHG28-203ENST00000621242 PCDHAC2Q9Y5I4 1007 aa19.98■□□□□ 0.79
SNHG28-203ENST00000621242 CERS5Q8N5B7 392 aa19.97■□□□□ 0.79
SNHG28-203ENST00000621242 PTPN22Q9Y2R2 807 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms